Streptomyces pactum: B1H29_35130
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Entry
B1H29_35130 CDS
T07142
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spac
Streptomyces pactum
Pathway
spac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
B1H29_35130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spac03400
]
B1H29_35130
DNA repair and recombination proteins [BR:
spac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
B1H29_35130
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
AQS71406
UniProt:
A0A1S6JI30
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All DBs
Position
8090522..8091646
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AA seq
374 aa
AA seq
DB search
MPRSIWSGAISFGLVTVPIHVVGATEDHSIRFHRYHLADQGRIRTRKVCELEDREVRSDE
IGKGYELTGTQIVPVTDEDLRELPLPTAKAIEIVAFVPLGSVDPIRIGDGYYLQPDGQVA
AKPYELLRRALARSSKVAVAKYAWSGRERLGLLRVRDEAIVLHAMRWPDEVRDPSSLTPP
PVEVAEEEIEGALALMDTMTRDDLEGDEFRDAYTDAVADLIEAKREHRAPPAAPEQEERP
GQVLDLMAALQESVSRAREHRGEDGRAEVHELPGPNKRATPRKAPAGETAAERTATKKTA
TKKTPAEKTAAEKTAAEKTATKKTAAEKTATRKTGAKEKPTAKEKPTAKDTTAKDTTAKK
ATARRPAARKPRSA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtcgatctggagcggcgccatctcgttcggcttggtgaccgtaccgatccat
gtggtcggcgccaccgaggaccacagcatccggttccaccggtaccacctggcggaccag
ggaaggatccggacccggaaggtctgcgagctcgaggaccgggaggtccgctccgacgag
atcggcaaggggtacgagctgaccgggacgcagatcgtgccggtcaccgacgaggatctg
cgggagttgccgctgccgaccgcgaaggccatcgagatcgtggcgttcgtgccgctgggg
tccgtggatccgatcaggatcggcgacggctactacctgcagccggacggacaggtcgcg
gcgaagccgtacgagctgctgcgtcgggcgctggcccggtcgtcgaaggtggcggtggcg
aagtacgcgtggtcgggcagggagcggctgggcctgctgcgggtacgggacgaggcgatc
gtgctgcacgccatgcgctggcccgacgaggtccgcgacccctcctcgctcacaccgccg
ccggtcgaggtggccgaggaggagatcgaaggggcgctcgcgctgatggacacgatgacc
cgcgacgacctggagggcgacgagttccgggacgcctacacggacgccgtcgcggacctg
atcgaggcgaagcgcgagcacagggcaccgccggcggcacccgagcaggaggagcggccg
ggccaggtgctggacctgatggccgccctgcaggagtccgtctcccgggcgagggagcac
cggggagaggacgggcgggccgaggtgcacgagctgcccgggccgaacaagcgggccacg
ccgaggaaggcgcccgccggggagaccgcggcggagaggaccgcgacgaagaagaccgcg
acaaagaagaccccggcagagaagaccgcggcagagaagaccgcggcagagaagaccgcg
acgaagaagaccgcggcagagaagaccgcgacgaggaagaccggggcgaaggagaagccc
acggcgaaggagaagcccacggcgaaggacacgaccgcgaaggacacgaccgcgaagaag
gcgacggcccgcagaccggcggcgcgcaaaccgaggagcgcgtag
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