Streptomyces paludis: DVK44_00035
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Entry
DVK44_00035 CDS
T06964
Name
(GenBank) hypothetical protein
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spad
Streptomyces paludis
Pathway
spad00040
Pentose and glucuronate interconversions
spad01100
Metabolic pathways
spad02020
Two-component system
spad02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DVK44_00035
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DVK44_00035
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVK44_00035
Enzymes [BR:
spad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
DVK44_00035
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DVK44_00035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectinesterase
Beta_helix
DUF1565
Motif
Other DBs
NCBI-ProteinID:
AXG76330
UniProt:
A0A345HI06
LinkDB
All DBs
Position
9201..11615
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AA seq
804 aa
AA seq
DB search
MSPSPLSPHGPSPDTASAAAPPHRRSRLARRTALLAAAAVVAAGLGAIPLAAGASAATDL
AHQTLPAKDGWAASGTGTTGGAAATQVVTVSTRAQLVAALGSASSTTPRIIQVKGTINAN
TDDAGAAVGCADYASGTGYSLSAYLKAYDPATWGRTKVPSGTQETARVAAAAKQAKNIQF
NVPSNTTLVGVPGSNARILGGALVLKNVDNVIVRNLTFNSPEDCFPQWDPTDGSTGNWNS
EYDAVTLRGATHVWVDHNTFSDGPTLDSASATYFDRKFQVHDGLLDITKGSDLVTVERNR
FTNHDKTTLIGSSDTDNASALRISIHHNVYTGITQRAPLTRIGQVHIYNNYYDTTKAGGY
AHSYTINSRAGAQVVAEKNYWKLSSDRKTSQLLSGDGTGAIAGSGNMVDGTVTDLAAAYN
AAADSSKQLKTAVNWTPTLTAGLESSAKDLPSSLAATAGAGILTAAGTTSTAAAAPVAAA
AAAPAVAAATRTVAADGSAQYRTVQAAVDASAAGDTVSVAKGTYREVLNVPTGKTGLTIR
GATGNAEDVVITYDNAAGTRKPDGTTYGTRGSATATFAANDLTVTGVTLQNTWLRAEHPE
ITDTQAVAVTAQGDRQIFRNVRVIGHQDTLLTYAPNATGQYRQYFRNSFISGDVDFLFGN
ATAVFDRVNITLRDRGAAAGGNNGYLAAPNTNSAKKYGMLITGSTISSSAQANTFSLGRP
WHPTDDAVGQLVIRNTALPAAIRVAAPWTDFGTFPWRSARFHEYANTGPGATVNANRPQL
TAAQAGEYTAAAYLAGTDGWNPTG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccccttcccctctctccccccacggcccctcaccggacacggcctccgcggccgcg
ccgccgcaccgccggtcacggctcgcccgccgtacggcgctgctcgcggcggcggccgtg
gtggccgccgggctgggcgcgatccccctcgccgccggcgcgagcgccgcgaccgatctg
gcacaccagacgctgcccgccaaggacggctgggcggccagtggcaccggcacgacggga
ggcgcggcggccacccaggtcgtgacggtctccacccgggcgcagctggtggcggcgctc
ggttcggcgagcagtacgactccccggatcatccaggtgaagggcacgatcaacgccaac
accgacgacgcgggcgcggccgtcggctgcgccgactacgcctcggggacggggtactcg
ctctccgcgtatctgaaggcgtacgacccggccacctggggccgtaccaaggtgccctcg
ggcacccaggagacggcccgggtcgccgcggcggccaagcaggcgaagaacatccagttc
aacgtcccgtcgaacaccacgctcgtcggggtccccgggtcgaacgccaggatcctcggc
ggcgccctggtgctgaagaacgtcgacaacgtcatcgtgcgcaatctgacgttcaacagc
cccgaggactgcttcccgcagtgggacccgaccgacggctccacgggcaactggaactcc
gagtacgacgcggtcacgctgcgcggggccacccatgtctgggtggatcacaacacgttc
agcgacggtccgacgctcgacagcgcgtcggcgacctacttcgaccgcaagttccaggtg
cacgacggcctgctcgacatcaccaagggctccgacctggtcaccgtggagcgcaaccgc
ttcaccaaccacgacaagacgacactgatcggctccagcgacacggacaacgcgagcgcg
ctgcgcatctccatccaccacaacgtctacaccggcatcacccagcgcgcgccgctgacc
cggatcggccaggtgcacatctacaacaactactacgacaccaccaaggccggcggctac
gcgcacagctacaccatcaactcccgcgccggcgcgcaggtggtggccgagaagaactac
tggaagctgtcgagcgaccgcaagacctcccagctcctgagcggggacggcaccggcgcc
atcgcgggcagcggcaacatggtcgacggtacggtgacggacctggccgccgcctacaac
gccgcggccgactcgtcgaagcagctgaagaccgcggtgaactggacgccgacgctcacc
gccggcctggagtcctcggccaaggacctgccgtcctccctggccgcgaccgcgggcgcg
gggatactgaccgccgccggcacgacgagcaccgcggccgcggcccctgtcgccgccgcc
gctgccgccccggcggtggccgccgccacccgtaccgtcgcggccgacggctcggcccag
taccgcaccgtgcaggcggcggtggacgcctcggccgccggtgacacggtgtccgtcgcc
aagggcacctaccgcgaggtgctcaacgtccccaccggcaagacgggcctgacgatcagg
ggcgccaccggcaacgccgaggacgtcgtcatcacgtacgacaacgcggcgggcacccgg
aagcccgacgggaccacgtacggcacccggggcagcgccaccgcgaccttcgcggccaac
gacctcaccgtcaccggggtcaccctccagaacacctggctgcgcgccgagcaccccgag
atcaccgacacccaggcggtggccgtcaccgcgcagggcgaccggcagatcttccgcaat
gtccgcgtcatcggccaccaggacaccctcctcacctacgcgccgaacgcgaccggccag
taccgtcagtacttccgcaactccttcatcagcggcgatgtcgacttcctcttcggcaac
gccaccgccgtcttcgaccgcgtcaacatcaccctgcgcgaccggggcgcggcggcgggc
ggcaacaacggctatctcgcggcgcccaacacgaactccgcgaagaagtacggcatgctc
atcaccggttccacgatcagcagttcggcccaggccaacaccttctccctcggccgcccc
tggcaccccaccgacgacgcggtcggccagctggtgatccgtaacaccgctctgccggcc
gcgatccgggtggccgcgccctggacggacttcggcacgttcccgtggcggtccgcgcgc
ttccacgagtacgcgaacaccggccccggcgcgacggtcaacgcgaaccgtccgcagctc
acggccgcgcaggcgggcgagtacacggccgccgcgtatctggccggcacggacggctgg
aacccgacgggctga
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