Streptomyces paludis: DVK44_00325
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Entry
DVK44_00325 CDS
T06964
Name
(GenBank) rhamnogalacturonase B precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
spad
Streptomyces paludis
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DVK44_00325
Enzymes [BR:
spad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
DVK44_00325
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AXG76381
UniProt:
A0A345HI57
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Position
complement(75261..76994)
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AA seq
577 aa
AA seq
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MATDPPTTSPATADPVSAEPTATARRHPSRRAVLGATAAGAVAAGAAVTGLTATPALAAA
FGYTDDGANYVISTGASLVFKVSKSTGDLTSLVYGTTEYEGYGGAHSHVESGLGASTVSI
AQSGSTILVSVVHGTLRHYYAARSGENNVYLWTNKADTSFTATRYIVRLKPGIFPNNAPD
GWVESSDAVIEASDVYRQSGGQTRSKHYSGVRVMDYDYIGYTTGSVGLWMVRSNHEKASG
GPFYRSLLRHANENGVGLYEILHYNQAQTEAERFGLQGPYVLSFTNGGAPASSLYAANLD
TSWVDGLGISGWVGRSARGRVAGVGIAGRDTAYPYTVGFANANAQYWAPAAASNGAYSCP
NMLPGTYTLTVYKGELAVHTTSVTVTAGNATALNTLTITNDPSAAPAIWRINNWSGTPAG
FKNAQLMTYAHPSDIRAAAWTGNVVIGSGETASFPCYIWSGVNDGILVYFRLTAAQAAAA
HTLRIGVTTAYINARPRITVNSWVSAIPSPPTQPSTRSLTTGSYRGNNNTFTYSVPASAW
QTDTGQYNVLKVNVVSGSTGSGFLSPGTSFDCLDLLT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgaccctccgaccacgagtccggcgaccgcggatccggtgtccgccgagccg
acggccaccgcccgccggcacccctcgcgccgcgccgtcctcggcgccaccgccgccgga
gccgtcgcggcgggagccgccgtcaccggactcaccgcgacccccgcgctggcggcggcc
ttcggctacaccgacgacggcgcgaactacgtcatcagcaccggcgccagcctcgtcttc
aaggtctccaagagcaccggcgacctgacctcactggtctacgggaccaccgagtacgag
gggtacggaggcgcgcactcccacgtcgagtccggactcggcgcctccaccgtcagcatc
gcgcagtccggctccaccatcctcgtctccgtcgtccacggcacactgcgccactactac
gcggcccgcagcggtgagaacaacgtgtacctctggaccaacaaggccgacacctcgttc
accgccacccgctacatcgtccggctcaagcccggcatcttccccaacaacgcccccgac
ggctgggtggagtcgtccgacgccgtcatcgaggcgtccgacgtctaccggcagtccggc
ggccagacccgctccaagcactactcgggcgtacgggtcatggactacgactacatcggc
tacaccaccggctcggtcggcctctggatggtccgcagcaaccacgagaaggcgtccggc
ggccccttctaccgctcactgctgcgccacgccaacgagaacggcgtcggactctacgag
atcctgcactacaaccaggcccagaccgaggccgaacgcttcggcctccagggcccgtac
gtcctgagcttcaccaacggcggcgcgcccgcctcctcgctgtacgccgcgaatctcgac
acctcctgggtggacggcctcgggatctccggctgggtcggcaggagcgcccgcggccgg
gtcgcgggcgtgggcatcgccggccgggacaccgcctacccgtacaccgtgggcttcgcc
aacgccaacgcccagtactgggccccggccgccgcgtccaacggcgcgtactcctgcccc
aacatgctgcccggcacctacacactgaccgtctacaagggcgaactcgccgtgcacacc
acctcggtgaccgtcaccgcgggcaacgccacggccctcaacaccctcacgatcaccaac
gacccgagcgccgccccggcgatctggcgcatcaacaactggagcggcacaccggccggc
ttcaagaacgcccagctcatgacgtacgcgcacccctcggacatacgggccgccgcctgg
accgggaacgtggtgatcggcagcggcgagacggcgtccttcccctgctacatctggtcg
ggcgtcaacgacgggatcctcgtctacttcaggctcaccgcggcccaggccgccgccgcg
cacaccctgcggatcggggtcaccaccgcctacatcaacgcccgcccccggatcaccgtc
aacagctgggtgtcggcgatcccctcaccgcccacccagccctccacccgctcgctcacc
accggctcctaccgcggcaacaacaacaccttcacctacagcgtgcccgcctccgcctgg
cagacggacacgggccagtacaacgtgctgaaggtgaacgtggtcagcggctccaccggc
tccggcttcctgagccccggcacctccttcgactgcctggacctgctgacctga
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