Streptomyces paludis: DVK44_03790
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Entry
DVK44_03790 CDS
T06964
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spad
Streptomyces paludis
Pathway
spad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVK44_03790 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spad03019
]
DVK44_03790 (recQ)
03400 DNA repair and recombination proteins [BR:
spad03400
]
DVK44_03790 (recQ)
Enzymes [BR:
spad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVK44_03790 (recQ)
Messenger RNA biogenesis [BR:
spad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVK44_03790 (recQ)
DNA repair and recombination proteins [BR:
spad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVK44_03790 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
AXG76948
UniProt:
A0A345HJS4
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All DBs
Position
874744..876837
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AA seq
697 aa
AA seq
DB search
MSAPDADTRAVDDPADAANGPDVLADLPADLPSGTAAAEPDEALAVLRRVFGYDSFRGSQ
AEIIAQVVDGGDALVLMPTGGGKSLCYQIPSLVRKGVGVVVSPLIALMQDQVDALRALGV
RAGFLNSTQDFEERRLVESEFLAGELDLLYLAPERLRVESTVRLLERGTIALFAIDEAHC
VAQWGHDFRPDYLALSSLHERWPDVPRIALTATATEATHQEIASRLKLQDARHFVASFDR
PNIQYRIAPKDDPKRQLLQLLRAEHPGDAGIVYCLSRASVEKTAEFLVKNGVDALPYHAG
LDARVRAANQSRFLREDGMVMVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGR
DGLPSTAWLAYGLQDVVQQRKMIDTSEGDEAHRRRLGQHVDAMLALCETVECRRVQLLAY
FGQPSTACGNCDTCLTPAESWDGTVPAQKLLSTVVRLKRERNQKFGAGQITDILLGKKTA
KVIQFDHDALSVFGIGTELREAEWRGVARQLLAQGLIAVEGDYGTLVLTEGSREVLGGRR
PVVLRREPEKAARAAKAPREKTSKGRAAPVDLPAEALPVFESLRAWRGATAKEQGVPAYV
IFHDATLRAIALLGPSTLAELGTVTGVGENKLAKYGEQILETLGGQDMGEDPRPAQVPAQ
AQAPGPEQAAGGRRAAAPDPDSAWGDDWDMEPDPDME
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcccgatgccgacacccgtgccgtagacgatcccgctgatgccgcaaacggt
cccgatgtcctcgccgacctccccgcggacctcccctccgggacggcggcggccgagccc
gacgaggcgctggccgtcctgcggcgcgtcttcggctacgactccttccgcgggagccag
gcggagatcatcgcgcaggtggtcgacggcggcgacgccctcgtgctcatgccgaccggc
ggcgggaagtcgctctgctaccagatcccctcgctggtccgcaaaggcgtcggggtcgtc
gtctccccgctcatcgcgctcatgcaggaccaggtcgacgccctgcgggcgctcggggtg
cgggccgggttcctgaactccacgcaggacttcgaggaacggcggctcgtggagagcgag
ttcctcgccggtgagctggatctgctctatctggcgccggagcggctgcgcgtcgagtcg
accgtacggctgctggagcgcggcacgatcgcgctgttcgccatcgacgaggcgcactgt
gtggcgcagtggggccacgacttccgccccgactatctcgccctgtcctcgctgcacgag
cgctggcccgatgtgccgcggatcgcgctgaccgcgaccgccaccgaggccacgcaccag
gagatcgcgtcccggctgaagcttcaggacgcccggcacttcgtggcgagcttcgaccgg
cccaacatccagtaccgcatcgcgcccaaggacgaccccaagcgccaactgctccagctg
ctgcgcgccgagcaccccggcgacgcgggcatcgtctactgcctctcgcgggcctcggtg
gagaagaccgccgaattcctcgtgaagaacggggtcgacgcgctgccgtaccacgcgggg
ctcgacgcgcgcgtacgggcggcgaaccagtcgcgcttcctgcgggaggacggcatggtg
atggtcgcgacgatcgcgttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcc
catctcgatctgccgaagtccgtcgaggggtactaccaggagacgggccgcgccgggcgc
gacgggctgccgtccaccgcctggctcgcgtacgggctccaggacgtcgtccagcagcgc
aagatgatcgacacctccgagggcgacgaggcgcaccggcggcggctgggccagcatgtc
gacgcgatgctggcgctctgcgagacggtcgagtgccggcgggtccagctcctcgcgtac
ttcgggcagccgagcaccgcgtgcggcaactgcgacacgtgtctgacgcccgccgagtcg
tgggacggcaccgtcccggcgcagaagctgctgtcgacggtggtacggctgaagcgtgaa
cggaaccagaagttcggcgccgggcagatcacggacatcctgctgggcaagaagaccgcg
aaggtcatccagttcgaccatgacgcgctcagtgtgttcggcatcggtacggagctgcgc
gaggccgaatggcgcggtgtggcaaggcagttgctggcccaggggctgatcgcggtcgag
ggcgactacggcacgctggtcctgacggagggcagccgcgaggtcctgggcgggcggcgg
ccggtcgtgctgcggcgagagccggagaaggccgcgcgggcggcgaaggcgccgcgcgag
aagacgtcgaaggggcgcgcggcgcccgtcgatctgccggccgaggcgctgccggtcttc
gagtcgctgcgcgcctggcgcggggcgacggcgaaggagcagggcgtgcccgcgtacgtc
atcttccatgacgcgacgctgcgggcgatcgcgctgctggggccgtcgacgctggcggaa
ctgggcacggtgacgggggtcggcgagaacaagctggcgaagtacggggagcagatcctg
gagacgctggggggccaggacatgggcgaggacccgcgcccggcccaggtcccggcccag
gcccaggccccgggcccggagcaggccgcgggcggtcggcgtgccgcggccccggacccg
gactcggcctggggcgacgactgggacatggagccggacccggacatggagtga
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