Streptomyces paludis: DVK44_04125
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Entry
DVK44_04125 CDS
T06964
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
spad
Streptomyces paludis
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
spad03051
]
DVK44_04125 (pafA)
Enzymes [BR:
spad01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
DVK44_04125 (pafA)
Proteasome [BR:
spad03051
]
Prokaryotic proteasome
Bacterial regulatory particles
DVK44_04125 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AXG77003
UniProt:
A0A345HJX9
LinkDB
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Position
complement(951792..953153)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVFCASQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDLTGQRKVRLASGREASALEIQREYYEKAVDFVERRGIRTGTV
EQVLELWGRTLDAIEAEDLDRIGTEIDWVMKYRLIERYRAKHNLTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKRGQAARICNDMKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDERVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcacctgacgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctctacctcgacgtgggttcg
catccggaatacgcgactcccgaatgcgacaacgtgaccgaactggtcacgcacgacaaa
gcgggcgagcgcattctggaaggattgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgactcggcgggaaactcctac
ggctgccacgagaactacctcgtcgcccgccacggcgagttctcccggctcgcggacatc
ctcatccccttcctcgtcacccggcagctcatctgcggcgcgggcaaagtgctccagacc
ccgcgcggcgccgtcttctgcgccagccagcgcgccgagcacatctgggagggggtcagc
tcagccaccacccgctcccgtccgatcatcaacacccgggacgagccgcacgccgacgcg
gagcgctaccggcggctccatgtcatcgtcggcgactcgaacatgtccgagacgaccatg
ctcctcaaggtcggcgccaccgatctcgtgctgcgcatgatcgaggcgggcacggtgatg
cgtgatctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgatctcacc
ggacagcgcaaggtgcgcctcgcgagcggccgggaagcctccgccctggagatccagcgc
gagtactatgagaaggccgtggatttcgtggagcgccgcggaatccgtacgggcacggtc
gaacaggtcctggaactctggggccgcacgctcgacgcgatcgaggcggaggatctcgac
cgtatcggcacggagatcgactgggtcatgaaataccggctcatcgagcggtaccgggcc
aagcacaatctgaccatgtcgcatccgagggtcgctcagatagacctcgcctaccacgac
attcaccgccgtcgtggtctctactacctgctggagaagcgcggccaggccgcgcggatc
tgcaatgacatgaagatcttcgagggcaagtcggtgcccccgcagaccaccagggcgcgg
ctgcgcggcgatttcatccgccgcgcccaggaacagcgcagggacttcacggtcgactgg
gtgcatctgaagctcaatgaccaggcgcagcgcacggtgctctgcaaagacccgttccgt
tctgtggacgaacgggtggaaaagctcatcgccggtatgtga
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