Streptomyces paludis: DVK44_10085
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Entry
DVK44_10085 CDS
T06964
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
spad
Streptomyces paludis
Pathway
spad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DVK44_10085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spad03019
]
DVK44_10085
03009 Ribosome biogenesis [BR:
spad03009
]
DVK44_10085
Messenger RNA biogenesis [BR:
spad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVK44_10085
Ribosome biogenesis [BR:
spad03009
]
Eukaryotic type
Pre-60S particles
RNases
DVK44_10085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXG78000
UniProt:
A0A345HMS6
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All DBs
Position
2360783..2361385
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVR
QMHTTSGLLDELAGGTTLAAAEEQVLAYVREHVKEPGKAPLCGNTVGTDRGFLLRDMATL
ESYLHYRIVDVSSIKELARRWYPRAYFNSPEKSGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKQIAAKHVLREV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgaatggtgtggatcgactgcgagatgaccgggctctcgttgacggacgac
gcactcatcgaggtggccgcgctggtcaccgactcggaactgaacgtgctcggtgaaggg
gtggacatcgtgatccgcccgccggacgcggcgctggagaccatgcccgaggtggtgcgg
cagatgcacaccacctcggggctcctcgacgagctggcgggcggcaccacgctcgcggcc
gccgaggagcaggtcctggcgtatgtccgcgagcatgtgaaggagccgggcaaggcgccg
ctgtgcgggaacacggtcggcaccgaccgcggcttcctgctgcgcgacatggcgacgctg
gagagctatctgcactaccggatcgtcgatgtctcctcgatcaaggagctggcccgccgc
tggtacccccgggcctacttcaacagcccggagaagagcggcaaccaccgtgccctcgcc
gacatccgcgaatccatcgcggagctgcgctactaccgcgaggccgtcttcgtgccgcag
cccggcccggactcggacaccgcgaagcagatcgccgcgaagcacgtgctgcgcgaggtc
tga
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