Streptomyces paludis: DVK44_15600
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Entry
DVK44_15600 CDS
T06964
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
spad
Streptomyces paludis
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spad03032
]
DVK44_15600 (gyrB)
03400 DNA repair and recombination proteins [BR:
spad03400
]
DVK44_15600 (gyrB)
Enzymes [BR:
spad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DVK44_15600 (gyrB)
DNA replication proteins [BR:
spad03032
]
Prokaryotic type
DNA Topoisomerases
DVK44_15600 (gyrB)
DNA repair and recombination proteins [BR:
spad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DVK44_15600 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AXG78895
UniProt:
A0A345HQC1
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Position
3552093..3554174
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AA seq
693 aa
AA seq
DB search
MLCQKGRFVADSGNPHEKSPSTGVGENGEVTASYDASAITVLEGLDAVRKRPGMYIGSTG
ERGLHHLVYEVVDNSVDEALAGHADTIDVTILADGGVRVIDNGRGIPVDIVPSEGKPAVE
VVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSSRVAVDVKRDGYRWTQDYKLGVPTA
PLDRKEETSDSGTTVTFWADPDVFETTDYSFETLSRRFQEMAFLNKGLTLTLTDERESAK
AVVGADVAGTDAPESAGEEQPARTVTYFYEGGIVDFVKYLNSRKGELIHPTVIDIEAEDK
ERMLSVEIAMQWNSQYSEGVYSFANTIHTHEGGTHEEGFRAAMTGLVNRYAREKKFLREK
DDNLAGEDIREGLTAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKIVHEHLTDWFDRNPN
EAADIIRKSIQAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPSKCEIFIVEGD
SAGGSAKSGRNPMYQAILPIRGKILNVEKARIDKILQNTEVQALISAFGTGVHEDFDIEK
LRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYA
YSDRERDALVELGKQNGKRIREDSIQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDDAA
QADDLFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaacccccatgagaagtctccg
tcgaccggcgtcggtgagaacggcgaggtgaccgcctcgtacgacgccagtgccatcacc
gtgctcgaaggtctggacgcggtccgcaagcgccccggcatgtacatcggctcgacgggc
gagcgcggactgcatcacctggtgtacgaggtcgtcgacaactccgtcgacgaggccctg
gcgggccacgcggacaccatcgacgtcacgatcctcgccgacggcggggtgcgcgtgatc
gacaacggccgcggtatcccggtggacatcgtcccgtccgagggcaagccggccgtcgag
gtcgtgctcacggtgctgcacgcgggcggcaagttcggcggcggcggttacgccgtctcc
ggcgggctgcacggcgtcggcgtctcggtcgtcaacgccctgtcgtcgcgggtcgcggtc
gacgtcaagcgcgacggctaccgctggacgcaggactacaagctcggtgtgccgaccgcg
ccgctggaccgcaaggaggagacgtccgactccggtacgacggtcacgttctgggccgac
ccggatgtcttcgagacgacggactactccttcgagacgctgtcccggcgcttccaggag
atggccttcctcaacaagggcctgaccctgacgctgacggacgagcgcgagtcggccaag
gccgtcgtgggcgcggatgtcgcgggcacggacgccccggagagcgcgggcgaggagcag
ccggcgcgtacggtcacgtacttctacgagggcggcatcgtcgacttcgtgaagtatctg
aactcgcgcaagggtgagctgatccacccgacggtcatcgacatcgaggccgaggacaag
gagcggatgctctcggtcgagatcgcgatgcagtggaactcgcagtacagcgagggggtg
tactccttcgccaacacgatccacacgcacgagggcggtacgcacgaggagggcttccgc
gcggcgatgaccgggctggtcaaccgctacgcgcgcgagaagaagttcctgcgggagaag
gacgacaacctggcgggcgaggacatccgcgagggtctgacggcgatcatctccgtcaag
ctcggtgagccgcagttcgagggccagacgaagaccaagctcggcaacaccgaggcgaag
acgtttgtgcagaagatcgtgcacgagcatctgacggactggttcgaccgcaatcccaat
gaggccgcggacatcatccgcaagtcgatccaggccgccacggcccgggtcgcggcccgc
aaggcgcgcgatctgacccggcgcaaggggctgctggagagcgcgtcgctgcccggcaag
ctgagcgactgccagtcgaacgacccgtcgaagtgcgagatcttcatcgtcgagggcgac
tccgccggcggttcggcgaagtccggccgtaacccgatgtaccaggccatcctgccgatc
cgcggcaagatcctgaacgtcgagaaggcccggatcgacaagatcctccagaacaccgag
gtccaggcgctgatcagcgccttcggcaccggggtgcacgaggacttcgacatcgagaag
ctccgctatcacaagatcatcctgatggcggacgccgatgtcgacggccagcacatcaac
acgctgctgctgacgttcctgttccggttcatgcgcccgctggtcgaggccggacacgtc
tatctgtcgcggccgcccctctacaagatcaagtggggccgggacgacttcgagtacgcg
tactccgaccgggagcgcgacgccctggtcgagctgggcaagcagaacggcaagcggatc
cgcgaggactcgatccagcgcttcaagggcctgggcgagatgaacgccgaggagctgcgg
gtcaccacgatggacgtcgaccaccgcgtgctcggccaggtcaccctggacgacgcggcc
caggccgacgatctgttctcggtgctgatgggcgaggacgtcgaggctcgtcggtccttc
atccagcgcaatgccaaggacgtccgcttcctcgacatctga
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