Streptomyces paludis: DVK44_18945
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Entry
DVK44_18945 CDS
T06964
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
spad
Streptomyces paludis
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spad03400
]
DVK44_18945
DNA repair and recombination proteins [BR:
spad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DVK44_18945
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Troponin-I_N
Motif
Other DBs
NCBI-ProteinID:
AXG82733
UniProt:
A0A345I1A9
LinkDB
All DBs
Position
complement(4260276..4260770)
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AA seq
164 aa
AA seq
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MTAREDTTGTEWVSTELSGHLRGRRARDTKPEVALRRPVHRLGLRFRLQRKVAARCTADF
VLPRYNVAVFVDGCFWHGCPVHGPNTFRGPNASLWEAKIETNKERDRRNTSAAEAVGWTV
VRVWECEIRADVERAALSVARQCDQAREPESAPSPVRGFRSTRP
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgtgaggacaccacaggcacggagtgggtcagcacggagctgagcggccat
ctgcgcggtcggcgcgcccgcgacacgaaaccggaggtggccctccgacgacccgtacac
cggctcggcctccggttccgtctacagcgcaaggtggctgcccgttgcacggcggacttc
gtcctgcccaggtacaacgtggcggtgttcgtagacggatgcttctggcacggatgtcct
gtgcacggcccgaatacgttccgcggcccgaacgcctccctgtgggaagcgaagatcgag
accaacaaggagcgcgaccgccggaacacctcagcagccgaggccgtcggctggaccgtc
gtccgcgtctgggagtgcgagatccgggcggacgtcgagcgcgctgcgctcagcgtcgcc
cggcagtgcgaccaggctcgcgagcctgagtcggcaccgtctcccgtccgtgggttccgg
tcaacgcgtccgtga
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