Streptomyces paludis: DVK44_19420
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Entry
DVK44_19420 CDS
T06964
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
spad
Streptomyces paludis
Pathway
spad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVK44_19420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spad03400
]
DVK44_19420
DNA repair and recombination proteins [BR:
spad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVK44_19420
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVK44_19420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
RsgA_GTPase
nSTAND1
AAA_22
AAA_25
DUF4350
Viral_helicase1
NACHT
BCA_ABC_TP_C
MeaB
cobW
NB-ARC
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AXG82746
UniProt:
A0A345I1C2
LinkDB
All DBs
Position
complement(4367139..4370090)
Genome browser
AA seq
983 aa
AA seq
DB search
MAASRTTTSRIAVKGARQNSLRDVSVEIPRDALVVFTGVSGSGKSSLAFDTIFAEGQRRY
VESLSAYARQFLGQLAKPDVDSIEGLSPAIAIDQKTTGRNPRSTVGTLTEVYDYLRLLYA
RIGVPHCPECGEPVGRRTPQQIVDRLLTPPEAAGEGAARVHVLAPVVRDRKGEHTDVFRQ
LMADGFSRVRVDGTVLPLTSPPALDKRAKHSIEVVVDRLALRPAARQRLTESVETALGLA
GGVVVVDFVDLDADDARRELRFSEEMACPRAHDLDLDVLEPRLFSFNAPWGACPECQGLG
TRREVDAALVVPDGEKSLAEGAIAPWTNTSGADYFTMLLEALAAEIGFSTSTPWRKLPAS
VRKTVLYGSPRRLHLTYRNRFGRERSHPAPYEGVIPHIERRSAENGDGGEGGAGTGASGA
APGSTGRFAGYLRELPCPACAGARLRPGVLAVTVGGRNIAELTALPIDELADFTAGLELV
GWQRRVAESVLAEVGERLRFLLDVGLDYLSLSRPAASLSGGEAQRIRLATQIGAGLAGVL
YVLDEPSIGLHQRDNQRLIETLLRLRDRGNTVIVVEHDDETVRAADWVVDIGPGAGEHGG
RVVYSGPPRELLAHPTSLTGAYLSGRREIPVPVRRQPSGGGPDGGGPSGGGPVLTVHDAT
EHNLRNVTVSFPLGRFTAVTGVSGSGKSTLVNDVLHTALARHFHRAHAVPGRHRTLTGVE
GLDKVVRVDQSPIGRTPRSNPATYTGVFDHLRTLFAQTPEAKVRGYRPGRFSFNIKGGRC
EPCQGDGTVKVEMNFLPDVYVPCEVCRGAQYNRETLDVRYKGKSIADVLAMTIAESLDFF
DGHAIISRHLKALDGVGLGYVKLGQPASTLSGGEAQRVKLATELQRRTRGRTLYVLDEPT
TGLHTDDIRQLLAVLHQLVDAGNTVVVIEHHLDVIKTADWIVDMGPEGGRGGGTVLAQGT
PEEIAAHPGSHTGRFLRPLLEKR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atcgccgccagccgtaccaccaccagccgtatcgctgtcaagggcgctcgtcagaacagt
ctccgtgatgtatccgtagaaattccccgggacgcgctcgtcgttttcaccggtgtatcc
ggttcgggaaagtcaagtctggctttcgacaccattttcgccgagggccagcgccgctat
gtcgaatcgctctcggcctatgcgcggcagttcctggggcagctggccaagccggacgtc
gactccatcgagggcctgtcgcccgccatcgcgatcgaccagaagaccaccggccgcaac
ccgcgctccacggtcggcacactcaccgaggtctacgactatctgcgcctgctgtacgcg
cggatcggcgtcccgcactgcccggagtgcggcgagccggtcggccgccggaccccgcag
cagatcgtggaccggctgctgaccccgccggaagcggccggcgagggcgcggcccgggtc
catgtgctggccccggtcgtccgggaccgcaaaggcgaacacaccgatgtgttccggcag
ttgatggccgacggcttcagccgggtccgggtggacggtacggtcctgccgctgacctcg
ccgcccgcgctcgacaagcgcgcgaagcactcgatcgaggtcgtcgtggaccgcctggcg
ctccggccggccgcccggcagcggctgaccgagtccgtcgagaccgcgctcggtctggcg
ggcggggtcgtggtcgtcgacttcgtcgatctcgacgccgacgacgcccggcgggagctg
cggttctccgaggagatggcctgtccccgcgcccacgatctcgatctggacgtcctggag
ccgcggctcttctccttcaacgccccctggggcgcctgcccggagtgccagggcctcggc
acccgcagggaggtcgacgccgcgctcgtcgtcccggacggggagaagtcgctggccgag
ggcgccatcgcgccatggaccaacaccagcggcgccgactacttcaccatgctgctcgaa
gcactggcggcggagatcggcttcagtacgagcaccccgtggcggaagctgcccgcgtcc
gtacgcaagaccgtgctgtacggaagcccgcggcggctgcacctcacgtaccggaaccgg
ttcggccgcgagcgctcgcacccggcgccgtacgagggcgtcatcccgcacatcgagcgg
cgcagcgccgagaacggcgacggtggcgagggcggggccggcaccggtgccagtggcgcc
gcccccgggagtacgggccgcttcgccgggtatctgcgcgaactgccctgcccggcctgt
gccggcgcgcggctgcgccccggcgtcctcgccgtcaccgtcggcggacgcaacatcgcc
gagctgacggccctgccgatcgacgaactggcggacttcacggccgggctggaactcgtc
ggctggcagcgccgggtggccgagtccgtcctcgcggaggtgggcgagcggctgcggttc
ctgctcgatgtcggcctggactatctgtcgctgagccggcccgccgcgagcctctccggc
ggcgaggcgcagcggatccggctggccacccagatcggggccgggctggccggtgtcctc
tacgtcctggacgagcccagcatcgggctgcaccagcgcgacaaccagcggctgatcgag
accctgctgcggctgcgcgaccggggcaacaccgtgatcgtcgtggagcacgacgacgag
accgtacgagcggccgactgggtggtggacatcgggccgggggccggtgagcacggcgga
cgggtcgtgtactcagggccgccgcgcgagctgctggcccaccccacctcgctgaccggc
gcgtatctctccggtcgccgcgagatacccgtaccggtacggcggcaaccgtccggcggc
ggaccggacggcggcggaccgtccggcggtggaccggtgctgaccgtgcacgacgccacc
gagcacaacctccggaacgtcacggtctccttcccgctgggccggttcaccgccgtcacc
ggcgtctcgggatcgggcaagtccacgctggtcaacgatgtcctccacaccgccctggcc
cggcacttccaccgggcgcacgcggtgccgggccggcaccgtaccctcacgggcgtcgag
ggactcgacaaggtggtacgggtcgaccagtccccgatcgggcgcaccccccggtccaac
ccggccacgtacaccggggtcttcgaccatctgcgcacgctgttcgcgcagacgccggag
gcgaaggtgcgcggctaccggccggggcggttctccttcaacatcaaggggggccgctgc
gagccgtgccagggcgacggcacggtgaaggtggagatgaacttcctgccggacgtttat
gtgccgtgcgaggtgtgccgcggcgcgcagtacaaccgcgagacgctcgacgtgcggtac
aagggcaagtccatcgccgacgtactggccatgaccatcgcggagagcctggacttcttc
gacgggcacgcgatcatctcgcgccatctcaaggccctggacggggtcgggctggggtat
gtgaaactcggccagcccgcctccacgctctccgggggcgaggcccagcgcgtcaagctc
gccaccgagcttcagcggcgcaccaggggccgcaccctttacgtactggacgagccgacc
accggtctgcacaccgacgacatccgccagctcctggccgtactgcatcaactcgttgac
gcgggcaacaccgtggtggtcatcgagcaccacctcgacgtgatcaagacggcggactgg
atcgtggacatgggccccgagggcggccggggcggcggcaccgtcctggcgcagggcacc
ccggaggagatcgcggcccaccccgggtcccacaccgggcggtttctgcgcccgctcctg
gagaagaggtga
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