Streptomyces paludis: DVK44_19990
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Entry
DVK44_19990 CDS
T06964
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
spad
Streptomyces paludis
Pathway
spad00040
Pentose and glucuronate interconversions
spad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DVK44_19990
Enzymes [BR:
spad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
DVK44_19990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
AXG79553
UniProt:
A0A345HS79
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All DBs
Position
4501807..4504224
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AA seq
805 aa
AA seq
DB search
MRELHVRPIARAHRLTALTAAGLLAAAGLLTSASTAVAAGPAAAGEAVAPAAADAPAWEA
ITFGQSTDLNFASNVLPEKVGFNYAAPEHPGTIDGRVVMESRGGKIAPGHDGLTFYHTTL
NPRTDNFVLTADMTVDQLGPETGGAVGSQDSAGIMVRDVNGGARQDPMVLGYEEVPAASN
IFASGVMRQGVTAIQRTGVVKPYGNTGSSMSATAFTTDSRYALPLGTPVTLRLERTDTEF
IISSTFTHVGQPVTFERRVTGADWVQDIDPDHMYVGFYAARNAKVTFDNARLELSEAHTQ
PRPATEPVPVKPALTVLSPPVTSGLDYPLRARPNVDGTVEFTDAAGTVLHRAHTTAHRTV
GHRVTLTAERTDFGLRFIPDDATSGGPVSQSLTVRTKAYGERGDGAVVHAAPEGAATAAG
TAADPVDLATALAYVAPGGKVLLHGGTYRPTATVGLDAAYSGTKDRPKTVKPYRGAQVVL
DGRGTLPITLRLDADHWRFEGFRVTGATGNGMRVSGSHNVIERMLFNYNMDSGFQMSGSG
DNSALWPAHNLILNSESHDNRDLTDINADGFAAKLGVGAGNVFRGNVAHHNIDDGWDLYN
RVNEGANMPVLLENNIAYANGRLSNGYHEDGDTGNGFKVGGEGLPVAHVVRGNIAFDNNM
DGFSDNFNPGPLELSHNTAFDNKRFNFIMRFNPYFSVEEQGVYRDNLSFRTPDGRGGDTP
VRDYISGDTDRTNVLFDGERATNEDATTIARARDFRSLTLPGTYTRHKDGSLIYGDFLRP
TRHSLLNTAGTKGGWIGALDGGRLR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagggagttgcatgtgagacccatcgcacgagcccaccgtctgacagccctgaccgcg
gcggggctgctggccgcggccgggctgctgacgtccgcctccacggccgtcgcggccggc
ccggccgccgccggagaggccgtcgccccggccgccgccgacgccccggcctgggaagcc
atcaccttcggccagtccaccgacctcaacttcgcctccaacgtgctgcccgagaaggtc
ggcttcaactacgcggcgcccgagcatcccggcaccatcgacggccgcgtcgtcatggag
agccggggcggcaagatcgcccccgggcacgacgggctcaccttctaccacaccaccctg
aacccccggacggacaacttcgtcctcaccgccgacatgacggtcgaccagctcggcccc
gagaccggcggcgccgtcggctcccaggacagcgccggcatcatggtgcgcgatgtgaac
ggcggggcgcgccaggacccgatggtcctcggttacgaggaggtgccggccgcgtccaac
atcttcgcctccggtgtcatgcgccagggcgtcaccgccatccagcgcaccggtgtcgtc
aagccgtacggcaacacgggcagcagcatgagcgccaccgcgttcaccaccgactcccgt
tacgcgctgccgctcggcaccccggtgaccctccgactggagcgcaccgacaccgagttc
atcatctcctcgaccttcacccacgtgggccagcccgtcaccttcgagcggcgggtgacc
ggcgcggactgggtccaggacatcgacccggaccatatgtacgtcggcttctacgcggcc
cgcaacgccaaggtcaccttcgacaacgcccgcctcgaactctccgaggcgcacacccag
ccccgcccggcgaccgagccggtcccggtgaagcccgcactcaccgtgctctctccgccg
gtgaccagcggcctcgactacccgctgcgggcccgccccaatgtcgatggcacggtggag
ttcaccgacgcggccgggaccgtactgcaccgtgcgcacaccaccgcgcaccgtacggtc
ggccaccgcgtcaccctcaccgccgaacggaccgatttcgggctgcgcttcatcccggac
gacgccacctccggcggcccggtgagccagtcgctgacggtacggacgaaggcgtacggc
gagcgcggtgacggcgccgtcgtccacgcggcccccgagggcgcggccaccgccgccggc
acggccgccgaccccgtcgacctcgccacggcgctcgcgtatgtcgcgccgggcggcaag
gtgctgctgcacggcggtacgtaccggccgacggcgacggtcgggctcgacgccgcgtac
agcggcacgaaggaccggcccaagaccgtcaagccgtaccgcggcgctcaggtcgtgctc
gacggccgcggcaccctccccatcaccctgcggctggacgccgaccactggcgcttcgag
ggcttccgcgtcaccggcgcgacgggcaacggcatgcgggtcagcggcagccacaatgtc
atcgagcgcatgctcttcaactacaacatggacagcggtttccagatgtccggcagcggc
gacaactccgccctgtggcccgcgcacaacctgatcctcaacagcgagtcgcacgacaac
cgggacctcaccgacatcaacgccgacggcttcgcggcgaagctcggcgtcggcgccggc
aatgtgttccggggcaatgtcgcacaccacaacatcgacgacggctgggacctctacaac
cgcgtcaacgagggcgccaacatgcccgtcctcctggagaacaacatcgcctacgccaac
ggccgcctcagcaacggctatcacgaggacggcgacaccgggaacggcttcaaggtcggc
ggcgagggcctgcccgtcgcccatgtcgtacgcggcaacatcgctttcgacaacaacatg
gacggcttctcggacaacttcaacccgggccctcttgagctgtcccacaacaccgcgttc
gacaacaagcgcttcaacttcatcatgcgcttcaacccctacttctccgtcgaggagcag
ggcgtctaccgcgacaacctgtcgttccgcaccccggacgggcgcggcggcgacactccc
gtacgcgactacatctccggcgacaccgaccgcaccaacgtcctcttcgacggcgagcgc
gccaccaacgaggacgccaccaccatcgcccgggcgcgcgacttccgctcgctgacgctg
ccgggcacgtacaccaggcacaaggacggctcgctgatctacggcgacttcctccggccc
acccgccactcgctgctcaacacggcggggacgaagggcggttggatcggcgcgctcgac
ggcggcaggctgcgctga
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