Streptomyces paludis: DVK44_29935
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Entry
DVK44_29935 CDS
T06964
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
spad
Streptomyces paludis
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spad03021
]
DVK44_29935
Transcription machinery [BR:
spad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DVK44_29935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
HTH_3
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AXG81214
UniProt:
A0A345HWZ0
LinkDB
All DBs
Position
complement(6757383..6758273)
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AA seq
296 aa
AA seq
DB search
MTTTTVRAAEAERAAGVLTWGSTAPSDGLPRIEDPGAIAPKDARALSKLFFDRLQLLEEG
TPEHSYARNTLIEMNQSLVRYAAGRFRNRGAGDMEDILQVGTIGLIKAIDRFDLSREVEF
TTFAIPYIVGEIKRFFRDTSWAVHVPRRLQELRVELAKARDQLAGTLDREPTVRELAALL
DLPEEEIVEGLVATNGYTAGSLDLPAGDEHGSGGGRTFADVLGEPDPAMEKVENLHALAP
LLERLDPRERGIVEMRFGREMTQSQIGAELGVSQMHVSRLLSRILARLRSGMLVEE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacaactgtgcgagctgccgaggcggagcgggcggcgggcgtcctgacctgg
ggatcgacagcgccctctgacggactgccacggatcgaggacccgggcgcgatcgcgccg
aaggacgcgcgggcgctgtcgaagctcttcttcgaccggctccagctcctcgaagagggc
acccccgagcacagttacgcccgtaacacgctgatcgagatgaaccagtcgctcgtacgg
tacgccgccggccgcttccgcaaccggggcgccggcgacatggaggacatcctccaggtc
ggcacgatcggtctgatcaaggccatcgaccgcttcgacctctcccgcgaggtcgagttc
accaccttcgccatcccctacatcgtcggcgagatcaagcgcttcttccgcgacaccagc
tgggccgtccatgtgccgcgccgcctccaggagctgcgcgtcgagctggccaaggcccgg
gaccagctggccggcacgctggaccgggagccgaccgtacgggagctggccgcgctgctg
gacctcccggaggaggagatcgtcgaggggctggtggccaccaacggctatacggccggc
tccctggacctgcccgccggcgacgagcacggcagcggcggcggacggaccttcgccgat
gtgctgggcgagccggacccggccatggagaaggtggagaatctgcacgccctggcgccg
ctgctggagcggctcgacccgcgcgagcgcggcatcgtggagatgcgcttcggccgggag
atgacccagtcgcagatcggcgcggagctgggcgtctcgcagatgcatgtctcccggctg
ctgagccgcattctcgcccggctgcggtcggggatgctcgtggaggagtga
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