Streptomyces paludis: DVK44_31590
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Entry
DVK44_31590 CDS
T06964
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spad
Streptomyces paludis
Pathway
spad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DVK44_31590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spad03400
]
DVK44_31590
Enzymes [BR:
spad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DVK44_31590
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DVK44_31590
DNA repair and recombination proteins [BR:
spad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DVK44_31590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_8
Prok-RING_1
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AXG81500
UniProt:
A0A345HXS6
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All DBs
Position
7157536..7158411
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AA seq
291 aa
AA seq
DB search
MPEVPEVEALREFLDGHLVGKEIVRVLPLTVNALKTYDPPLAALEGATVTAVGRHGKYLD
LVAGDVPGGALHLAVHLARAGWLRWKDSFPAEPPRPGRNPLALRTVLAGGDGFDLTEAGT
AKRLAVHLVRDPAEVPGIARLGPDPLAASFDRTALAGLLAGERRRIKGALRDQRLIAGIG
NAYSDEILHAARMSPFKPVANLSEDEITTLYEALRDTLREAVERSRGVAAGRLKAEKRSG
LRVHGRTGEACPVCGDTIREVSFSDSSLQYCPTCQTGGRPLADRRMSRLLK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagtacccgaggtcgaagcattgcgggagtttctcgacggccacctggtgggc
aaggaaatcgtccgtgtcctgccgctgacggtcaatgccctgaagacgtacgatccccca
ctcgccgcgctggagggcgcgaccgtgacggcggtcggccgccacggcaagtatctcgac
ctcgtcgcgggggacgtcccggggggtgcgctgcacctggcggtccatctggcccgggcg
ggctggctgcgctggaaggactccttccccgccgagccgccgcggccgggccggaacccg
ctggccctgcggaccgtactcgccggcggtgacggcttcgatctcacggaggcgggcacc
gccaagcgtctcgccgtccatctcgtacgggacccggccgaggtccccgggatcgcccgg
ctcggccccgatccgctcgccgcctccttcgaccggacggccctggcggggctgctcgcg
ggggagcggcggcggatcaagggcgcgctgcgcgatcagcggctgatcgccgggatcggc
aacgcgtacagcgacgagatcctgcacgcggcgcgcatgtcgcccttcaagccggtggcg
aacctctccgaggacgagatcaccaccctgtacgaggcgctgcgcgacaccctgcgcgag
gccgtcgagcgctcgcgcggggtggccgcggggcggctcaaggcggagaagcggagcggg
ctgcgggtgcacggccggacgggtgaggcgtgtccggtctgcggcgacacgatccgggag
gtgtccttcagcgactcgtcgctccagtactgccccacctgccagacgggcggccggccg
ctcgccgaccggaggatgtcccggctgctcaagtag
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