Streptomyces paludis: DVK44_32230
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Entry
DVK44_32230 CDS
T06964
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spad
Streptomyces paludis
Brite
KEGG Orthology (KO) [BR:
spad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spad03400
]
DVK44_32230
Enzymes [BR:
spad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DVK44_32230
DNA repair and recombination proteins [BR:
spad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DVK44_32230
Prokaryotic type
DVK44_32230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXG81609
UniProt:
A0A345HY35
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All DBs
Position
complement(7317466..7318884)
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AA seq
472 aa
AA seq
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MTASPTTARPRTAPPRTVAVVLFTSDLRLHDHPPLRAALAAADEVVPLFVRDPGVHAAGF
DAPNRVAFLSDCLVDLDTSLRRRGGRLVLRTGPVVREVAAVVTECGASEVHLAAGVTRYA
QHRQEALREVLGARGVALRVHDAVITALAPGAVTPSGGDHYAVFTPYFRRWSQERLRAVL
PAPRAVRVPDTVRGEPLPSRDRVPGTSPGLPPGGETRGRDRFSRWARADLPAYEARHDDL
AGDATSRLSPYLHFGALSPVELVGRARAKDGPGAEAFVRQLCWRDFHHQVMCSRPETSVR
DYRPRHDRWLTEDDAAEDVTAWREGRTGYPVVDAAMRQLRHEGWMHNRARLLAASFLTKT
LYVDWRVGARHFLDLLVDGDVVNNQLNWQWVAGTGTDTRPNRVLNPVRQGKRFDPEGAYV
RRWVPELRDVATAFVHEPWRLREDDPARPDYPGPLIDLADGLARFRHARGQD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcgcccacgacagcacggcccaggacggcaccgcccaggaccgtcgccgtc
gtcctgttcacctccgacctgcggctgcacgaccatccgccgctgcgcgcggcgctcgcc
gcggccgacgaggtggtgccgctgttcgtacgcgatcccggtgtgcacgccgccggcttc
gacgcgccgaaccgggtcgccttcctcagcgactgcctcgtcgatctggacacctcgctg
cgccgtcgcggcggccggctcgtgctgcgcacgggacccgttgtccgggaggtggcggcg
gtcgtcaccgagtgcggcgcgagcgaagtgcacctggcggccggggtgacccgttacgcc
cagcaccgccaggaggcgctgcgcgaggtcctgggcgcgcgcggggtggcgctgcgggtg
cacgacgcggtgatcaccgccctcgcccccggcgcggtgaccccgtcgggcggcgaccac
tacgccgtcttcaccccgtacttccgccgctggtcgcaggagcggctgcgcgccgttctg
cccgctccgcgcgccgtacgggttccggacacggtgcggggcgagccgctgccttcccgc
gaccgggtccccggcacctcaccggggctgcccccgggcggggagacccgtggccgcgac
cggttctcccggtgggcccgcgcggaccttccggcgtacgaggcgcgccacgacgacctg
gcgggcgacgcgacctcccggctctccccgtatctgcacttcggagccctctccccggtg
gagctggtcggacgggcccgcgcgaaggacggtcccggcgcggaggcgttcgtgcgccag
ctgtgctggcgcgacttccaccaccaggtcatgtgctcccggccggagacgtcggtacgc
gactaccgtccccggcacgaccgctggctcaccgaggacgacgcggccgaggacgtgacg
gcgtggcgggagggccgtaccggctatccggtggtggacgccgcgatgcgccagttgcgc
cacgagggctggatgcacaaccgggcacgcctgctggcggcgagcttcctgacgaagacg
ctgtacgtggactggcgggtcggcgcccggcacttcctggacctcctggtggacggcgat
gtcgtcaacaaccagctcaactggcagtgggtcgccggaaccggcaccgacacccgcccg
aaccgcgtcctcaaccccgtacgccagggaaagcggttcgaccccgagggcgcgtacgtc
cgccgctgggtgccggagctgcgcgacgtggcgaccgccttcgtccacgaaccgtggcgg
ctgcgcgaggacgaccccgcgcggccggactacccggggcccctgatcgacctcgccgac
ggcctggcccgcttccggcacgcgcgcggccaggactga
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