Sporosarcina pasteurii: E2C16_00780
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Entry
E2C16_00780 CDS
T06007
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spae
Sporosarcina pasteurii
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spae03019
]
E2C16_00780 (yhaM)
Messenger RNA biogenesis [BR:
spae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E2C16_00780 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QBQ04329
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All DBs
Position
154144..155082
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AA seq
312 aa
AA seq
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MKKLLDYQVGESIDLYLMIKQATKGITTKGSPFMTVILQDKSGELEAKLWDTTDAHVETY
RAGTIVRVGGDIHEYRGKNQLRIKAIRPAKEEEGVTIADLIPSSEKSKEVLFEELMAFFF
EMKNPQIQRITRHLLKKHETAFKTYPAATRNHHDYVSGLIDHVVSMLNLGKALADLYPSL
NKDLLYAGIILHDVGKVIELSGPIGTQYTVEGNLLGHITIMVNEIEKAAEELNIEGEEVM
LLQHMVLSHHGKEEWGSPKRPMLKEAEMLHYIDNIDAKMNMLDRALSQAKPGEFTERIFP
LENRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattactggactatcaagtaggagaatcaatcgatttatatttaatgattaaa
caagcaacaaaaggaattacgacaaaaggcagtccctttatgacggtcattttacaagat
aagagtggagaattagaggcgaaattatgggatacgacagatgcccatgtagaaacgtat
cgcgcgggaacgattgtgagagttggtggagatattcatgaataccgtggtaaaaaccaa
ctccgtattaaagccattcgtccggctaaagaagaagaaggtgtgacgattgctgattta
attccatcctctgaaaaaagtaaagaagtgctatttgaagaactgatggcattctttttt
gaaatgaaaaatccacagattcaacgaattacaaggcatttattaaagaaacatgaaaca
gcttttaaaacgtaccctgcagcaacgagaaatcaccatgactatgtgtctggtttaatc
gaccacgttgtttccatgttgaacttaggaaaagcgctagctgatttatatccttccttg
aataaagatttattgtacgcaggcattattttgcatgatgttggaaaagtgattgaattg
tccggaccaattggtacgcagtatacagtagaggggaatttgcttggacacatcacgatt
atggtcaatgaaattgagaaagcggcagaagaattgaacattgaaggcgaagaagtgatg
ctattacagcatatggtgttgtcgcatcatggtaaagaagagtggggcagcccgaaacgt
ccaatgttaaaagaggcggaaatgcttcattacatcgataatattgatgcgaaaatgaat
atgttagaccgtgcactgagtcaagcgaagcctggtgaatttacggaaagaattttccca
ttagagaaccgctcgttttataagccgacctttgaataa
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