Sporosarcina pasteurii: E2C16_00825
Help
Entry
E2C16_00825 CDS
T06007
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
spae
Sporosarcina pasteurii
Pathway
spae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2C16_00825 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_00825 (uvrB)
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2C16_00825 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2C16_00825 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
AAA_30
AAA_19
AAA
DUF87
AAA_22
TrwB_AAD_bind
AAA_7
AAA_5
AAA_25
HerA_C
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
QBQ04337
LinkDB
All DBs
Position
160463..162442
Genome browser
AA seq
659 aa
AA seq
DB search
METFNLQAPYAPAGDQPEAIQQLIEGVNRGERHQTLLGATGTGKTFTVSNVVKEINKPTL
VMAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYFQPEAYVAHTDTYIEKDASVNDEIDK
LRHSATSALFERNDVLIVASVSCIYGLGSPKEYRDMVVSIRKGMEIGRDELLRKFVGIQY
SRNDLNFTRGTFRVRGDVVELFPASRDERCMRIEFFGDEIDRIREVDALTGEVIGDREHV
AVFPASHFVTGEEKMLQAIENIEVELEEQLAKLKRENKLLEAQRLEQRTRYDLEMMKEMG
FCSGIENYSRHLTLRPPGASPYTLLDYFPDDFLLVVDESHVTLPQVRGMFNGDQARKQVL
VDHGFRLPSALDNRPLRFEEFEERIREAIYVSATPGPYEIEHTPKMIEQIIRPTGLLDPT
IDVRPIEGQIDDMLHEINLRIERNERVLITTLTKKMSEDLTDYLKEIGIKVQYLHSEIKT
LERIEIIRELRLGTYDVLVGINLLREGIDIPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNSEGHVIMYADRMTDSMTKAISETERRREIQEAYNKEHDITPKTIKKEIHEVIRATEV
AEERETYLDKITHGKKLTKEEKESMLTVLEKEMKEAAKDLQFELAAQLRDAILELKAER
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtggaaacatttaatttgcaagctccatatgccccagccggagatcaaccagaggcgatt
caacaactgattgaaggggttaatcgaggagaaagacatcaaacgttacttggagcgacc
ggtacaggaaaaacatttacggtctccaatgttgtgaaagaaattaataaaccgacgtta
gtgatggcccacaacaaaacattggcaggccaactgtatagtgaatttaaagagtttttc
ccggataacgctgtagaatacttcgttagttattatgattattttcaaccagaagcttat
gttgcgcatacagatacgtatattgaaaaagacgcgagtgtgaacgatgaaattgataag
ttgcgacactcagcaacttcagctttattcgaaagaaatgatgtgcttatcgtcgcttcc
gtatcatgcatatatgggctaggttcaccaaaagagtatcgagatatggtcgtatcgatt
cggaaaggaatggaaatcggccgagatgaattgctacggaaatttgtgggtattcaatac
tcgcgcaatgatttgaattttactcgcggtacatttcgcgttcgcggcgatgtcgttgaa
ttgtttcctgcatcaagagatgaacgttgtatgcggattgagttttttggcgatgagatt
gaccgcattcgtgaagttgatgcattaacaggagaggttatcggtgacagagaacatgtc
gctgtattcccggcttcccacttcgtcacaggtgaagagaaaatgttacaagcgattgaa
aatattgaagtggaattggaagaacaattagctaaattgaagcgtgaaaataagttactc
gaagcacaacgattagagcaacgtacacgctacgatttagaaatgatgaaagaaatgggc
ttttgctcggggattgaaaactattcaagacatttaacgcttcgccctccaggtgcctca
ccgtatacgttacttgactatttcccggatgacttcctgttagttgtcgatgaaagtcac
gtcaccttaccgcaagtgcgtgggatgtttaatggagaccaggcgagaaaacaagtttta
gtcgatcacggttttcgtctgccgtcagcactagataaccgcccgcttcgttttgaggaa
tttgaggaacgaattcgtgaagcgatttatgtgtctgccacgccaggaccttatgaaata
gaacacacaccgaaaatgattgaacaaattattcgtccaacaggtttattggatccgaca
atagatgttcgaccaatagaaggacaaattgatgatatgctgcatgaaattaatttgcga
attgaaagaaatgaacgcgtactcattacgacattaacgaagaaaatgtctgaggattta
actgattatttaaaagaaatcgggattaaagtacaatatcttcattcggaaataaaaacg
ttagaaagaatagaaataattagagagttaagacttggtacgtatgatgttctcgttggc
attaatttgctcagagagggtattgatattccagaagtgtcacttgttgcgattcttgat
gctgacaaagaaggttttttacgttctgaacgttcattaattcaaacaattggaagagca
gctagaaattcagaagggcatgtcattatgtatgcagaccgcatgacagattcgatgact
aaagctattagtgaaacggaaagacgtcgtgaaattcaagaggcttataataaagagcat
gacattacaccgaaaacaatcaagaaagaaattcatgaagtaatccgtgctacagaagtt
gcggaagaacgagaaacgtatcttgataaaattacacatggtaagaaactaacgaaagaa
gagaaagagtctatgttaacggttcttgagaaagaaatgaaagaagccgcgaaagatttg
caattcgaactagctgctcagttaagggatgccattttagagttaaaggcagaaaggtag
DBGET
integrated database retrieval system
