Sporosarcina pasteurii: E2C16_02815
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Entry
E2C16_02815 CDS
T06007
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03030
DNA replication
spae03410
Base excision repair
spae03420
Nucleotide excision repair
spae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2C16_02815 (polA)
03410 Base excision repair
E2C16_02815 (polA)
03420 Nucleotide excision repair
E2C16_02815 (polA)
03440 Homologous recombination
E2C16_02815 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spae03032
]
E2C16_02815 (polA)
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_02815 (polA)
Enzymes [BR:
spae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2C16_02815 (polA)
DNA replication proteins [BR:
spae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E2C16_02815 (polA)
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E2C16_02815 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2C16_02815 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Cnd2
FUR
Motif
Other DBs
NCBI-ProteinID:
QBQ04675
LinkDB
All DBs
Position
555182..557806
Genome browser
AA seq
874 aa
AA seq
DB search
MTKKKIVLLDGNSLAYRAFFALPLLTNDQGIHTNAVYGFTMMLQNILEEEKPTHMLVAWD
AGKTTFRHKTFDEYKGGRQKTPSELSEQFPYLRKMLKAYNIPQYELDQYEADDIIGTLSH
QGDKKDAEVVVISGDKDLTQLTTEHTTVFITRRGITDTEKYTPEHVMEKYGIQPHQIIDM
KGLMGDSSDNIPGVPGVGEKTALKLLKEYGSIEEIYASLDKITAKRLNENLTQNKETAFM
SRDLATIVVDAPITISIDDLSYSGPNMDELINIYQELKFNTLLEKLGGNPIEEKQEDVEV
TTVSEIDVSQLSNEMALHIEMMDENYLRANIEGVSLTDDTKTLYLPFEVVQKSDSFQAWL
KDDTKKKLCTDSKAARASLARHGVEVNGIDFDLLLGSYIVNPSTSSSDVASIAKQFGYTN
VQQDETVYGKGARKALPESDVLAEHAGRKALAVWNLRSTIEEQLKENEQFDLYHELELPL
ALILGKMESTGVATDKEALAKIGTELSARITDLETLIYEIAGEKFNINSPKQLGVILFEK
IGLTPIKKTKTGYSTAADVLEKLASEHEIISHILLYRQLTKLNSTYIEGLLKEIHEDGKI
HTRFQQALTTTGRLSSINPNLQNIPVRLEEGRKIRAAFVPSEESWSLFAADYSQIELRVL
AHMSEDEKLIQAFKDNADIHRSTAADVFGVEVDEVTAEMRDAAKAVNFGIIYGISDYGLS
QNLNITRKEAAQFIETYLASFPGVKKYMDDIVQTAKEQGYVTTLLNRRRYLPEIKSSNFN
LRSFAERTAMNTPIQGSAADIIKQAMIDMDARLEKEGLQARMLLQVHDELIFETPEEEIE
ILEKIVPEVMEAAIALNVPLKVESSHGKSWYDMK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaaaagaaaatcgtactgcttgatggaaacagtctcgcgtatagggcgtttttt
gccttaccgttattaacaaacgatcaaggcattcatacaaatgcagtttatggttttaca
atgatgctgcaaaatattttagaagaagaaaagccaacgcatatgctcgttgcttgggac
gctggtaaaacaacgtttcgtcataaaacatttgatgaatataaaggtggtagacaaaag
acaccatccgaactttccgagcaattcccttatttaagaaaaatgttgaaggcgtataat
ataccccaatatgaacttgaccaatatgaggcagatgacattattggaacattaagtcat
caaggggacaaaaaagatgctgaagtcgttgtgatttctggcgataaagacttaacacaa
ttgacgacggagcatacaacagtattcatcactagaagagggattaccgatactgaaaaa
tatacgccagaacatgtgatggaaaagtatgggatacaaccccaccaaattattgatatg
aaaggattgatgggtgattcttcagacaatattccgggggttccaggagttggtgagaag
acagccttaaaactattgaaggaatatggatccattgaggaaatctatgcttcactcgat
aaaattacggctaaaagattaaatgaaaatttaacacaaaataaagaaacggcttttatg
agtcgcgatttagcaacgattgttgtagatgctccaattacgatttcaatcgatgattta
tcttatagcggtccaaatatggacgagctcattaacatttatcaagagttgaaattcaat
acattacttgaaaagcttggtggaaatccaattgaggagaagcaggaagatgttgaagtg
acaactgtatcagagatagatgtcagtcaactttcaaatgaaatggcacttcatatagaa
atgatggatgaaaactatttgcgggcgaatatcgaaggtgtgtcacttacagacgatacg
aagacgctgtatttgccgtttgaagttgtccaaaaatctgactcatttcaggcttggtta
aaagatgatacgaaaaagaagctatgtacggattccaaagctgcacgtgcctcgctagct
cgccatggagtagaagtaaatgggattgattttgatttacttctagggtcttatattgtt
aacccatcaacttcatcgtcagatgtcgcatcgattgccaaacaatttggctatacgaat
gtgcaacaagacgaaacggtttatggaaaaggtgctcgaaaagcattaccagaaagcgac
gtacttgcagaacatgctgggcgaaaagcactggcggtttggaatcttcgctcgacaatt
gaagaacagcttaaagagaacgaacaatttgatctatatcatgagttggaattgccgctt
gcactcatcctaggaaaaatggagtctactggggtagcaactgataaggaagcattagcg
aaaatagggacggaactttcagcaagaattacggacttagaaacgttaatttatgaaatt
gctggcgagaaatttaatattaattctccgaaacaattaggtgtcattttatttgaaaag
attgggcttacaccgattaaaaagacgaagaccggttattcaactgcggctgatgtgctt
gaaaagttagcaagcgaacatgagatcatttctcacattttactgtaccgtcaactaaca
aaattaaattcaacgtatattgaagggttattaaaagaaattcatgaagacggtaagatt
catacacgttttcaacaagccctaacaacgactggtcgactcagttcaatcaacccaaac
ttacaaaatatccctgttcgtttggaagaaggtcggaaaattagagcggcattcgttcct
tcagaggaaagttggtcgctatttgctgcggattactcgcaaatcgaattgcgcgtacta
gcgcatatgtcggaagacgaaaagttaatacaagcgtttaaagacaatgctgacattcat
agaagtacagcggcagatgtgtttggtgtagaggtagacgaagtcaccgctgaaatgcga
gatgctgcaaaagcagtaaactttgggattatttatggaattagcgattatggattatcc
caaaacttaaatattacgagaaaagaagctgcgcagtttattgagacctatttagcaagc
ttcccaggtgtaaaaaagtatatggatgatattgttcaaacggcgaaggaacaagggtat
gtaacgactttattgaatagaagacgctacttaccggagattaagagttccaattttaat
ttacgaagcttcgctgagcgtacggcgatgaatacacctatccagggaagtgccgcggat
atcattaagcaggcgatgattgatatggatgctcgacttgaaaaagaaggattgcaagca
agaatgcttcttcaagttcatgacgaactcatttttgaaacgcctgaagaggaaattgaa
atactagaaaaaattgtaccagaagtgatggaggcagcaattgcgttaaatgttccatta
aaagtggagtcttcacacggaaaatcttggtatgatatgaagtga
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