Sporosarcina pasteurii: E2C16_02960
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Entry
E2C16_02960 CDS
T06007
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2C16_02960 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spae03019
]
E2C16_02960 (recQ)
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_02960 (recQ)
Enzymes [BR:
spae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2C16_02960 (recQ)
Messenger RNA biogenesis [BR:
spae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2C16_02960 (recQ)
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2C16_02960 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DNA_pol_B_3
Motif
Other DBs
NCBI-ProteinID:
QBQ04703
LinkDB
All DBs
Position
586055..587836
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AA seq
593 aa
AA seq
DB search
MLTKATEVLRDYFGYDSFRTGQEQVIESVLQGKDTLCVMPTGGGKSLCYQVPALVMEGTV
LVISPLISLMKDQVDALKEAGISAAYINSTMTSEEYHETMEATIRGEYRLLYIAPERLDS
PSFTNRLQLMNVPIVAIDEAHCISQWGHDFRPSYRNIRKMVSLFHEKPVVLALTATATPA
VREDICTQLKINEENTVVTGFERENLTFSVIKGQDREKFVIDYVKKNEGEAGIIYAATRK
AVDHLYDVLSKRGVPVGKYHAGLSDITRQEGQEQFLNDETSVMIATNAFGMGIDKSNIRY
VIHYQMPRNMESYYQEAGRAGRDGLKSDCTLLFSSQDVQTQRFLIDQSLDETRIPMELQK
LQSMVDYCHTEACLQKFIIQYFGEENVSDCGRCANCTDTRESLDVTEDVQKVLSCVIRMG
QRFGKTMIAQVLTGSRNKKVKDFGFDKLTTYGILKGRSAKDVSDFIEFIISENYLGVEHG
QFPIIYVAEAGKDVLMGKQKVFRKVSVVTKQITVDNPLFEKLRDLRRQLAQDAGVPPFVV
FSDKSLHDMVSRMPTTEEAFLEVNGVGLTKLERYGEPFLKEIQAYQKETVSTS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgctaactaaagcaacagaggttttacgggattattttgggtatgactcgtttagaacg
ggacaagagcaagtcattgaaagtgtattgcaagggaaggacacgctatgtgtgatgccg
actggcggtggaaaatcactttgttatcaagtaccagcacttgtgatggaaggaactgta
cttgtcatttcaccgctgatttcattgatgaaagaccaagtagatgcactgaaagaagca
gggatttcagcggcttatattaatagtacaatgacttcagaagaataccacgagacaatg
gaagcgacgattcgaggagagtatcgtttattatacattgcgcctgagcgacttgattct
ccttcttttacaaatcgtttgcaacttatgaacgtgccaattgtggccattgatgaagcc
cattgtatttctcaatggggccatgattttaggccgagctaccgaaatatccgtaaaatg
gtttctctttttcacgaaaagccggttgttctcgcattaacggcaacagcaacaccagcc
gttcgagaagatatttgtacacaactgaaaattaacgaagaaaatacagtcgtgacagga
tttgagagagaaaacttaactttttcggtcattaaaggtcaggacagagaaaagtttgtc
attgattatgtaaagaaaaatgaaggcgaagcgggaattatctatgcggcaacaagaaaa
gcagtcgatcatctgtatgatgtgctatcaaaacgtggtgtacctgtaggaaagtatcat
gcgggtctatctgatataacacgtcaggaaggtcaagaacagtttttaaatgatgaaacg
tccgtcatgattgcgacgaatgcgtttggaatgggaatcgataaatccaatatccggtat
gtaattcattaccaaatgccacgtaatatggaaagttattatcaagaagctggacgtgct
ggacgtgatgggttaaaaagtgattgtacactgttattttcatcacaagacgtacaaacg
caacgctttttaatcgaccaatcattagatgaaacgagaattccgatggagttacagaag
ttacagtcaatggtcgattattgtcatacggaagcttgtttacaaaagtttatcattcaa
tactttggcgaagaaaatgtatctgattgtggtagatgtgctaactgtacagatacgcga
gaaagtttagatgtaaccgaagacgtacagaaagtattatcttgcgtaattcggatgggc
caacgcttcggtaaaacgatgattgcacaagtattaacaggatcacggaataaaaaagtg
aaagatttcggttttgataaattaacaacgtatggcattttaaaaggtagaagtgcaaaa
gacgtctctgattttattgaatttattatttcggaaaactatttgggtgttgagcacgga
caatttccgattatttacgtggcggaggctggcaaagatgttttaatggggaagcaaaaa
gtgttccgcaaagtatctgttgtcacgaaacaaattacggttgataacccattatttgaa
aaactccgtgatttacgtcgtcaattagcgcaagatgctggggttcctccatttgttgtc
ttctcagataaatcgttacatgatatggtcagccgtatgccaacgactgaagaggcattt
ttagaagtgaatggtgtggggcttacgaaattggaaagatacggtgagccctttttgaag
gaaattcaagcctatcaaaaagagactgtgtcaactagttga
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