Sporosarcina pasteurii: E2C16_06295
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Entry
E2C16_06295 CDS
T06007
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2C16_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_06295
Enzymes [BR:
spae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
E2C16_06295
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E2C16_06295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QBQ07073
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All DBs
Position
complement(1287602..1288492)
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AA seq
296 aa
AA seq
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MLLGSHVSMSGKKMLLGSSEDAVKYGATTFMIYTGAPQNTRRKPVEELNIEAGLAHMEEH
GISNVVVHAPYIINIANTTKPATFQLGVDFLQSEIERTAALGVNQIVLHPGAHVGAGVDK
GIAKIIEGLNEVLSQDYPVKIALETMAGKGTEIGRSFDEIARIIDGVTHNERLSVCFDTC
HVHDAGYDIVNQFDHVLHEFDSLIGKERISVIHINDSKNERGAGKDRHENLGFGYIGFDA
LHNIVHHSDFVDIPKILETPFVGNDPKKKHAPYQVEIEMLREGIYRPEMIEQLKQS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgctccttggctcacacgtatcaatgagtggcaagaaaatgttgctcggatcaagtgag
gatgctgttaaatacggagcaactacttttatgatttatacaggcgctcctcaaaataca
cggagaaagcctgttgaggaactaaatattgaagccggtctagcacatatggaagaacat
ggtatctctaatgttgtcgtgcatgcaccgtacattattaatattgcaaatacgactaaa
ccggcaacatttcaacttggtgttgatttcttacaatcagaaatcgagcgtactgctgca
ctcggcgtgaatcaaattgtgttacatccgggtgcgcatgtaggcgctggggtcgacaaa
ggaattgcgaaaatcattgaaggcttgaatgaagtcctttcacaagattatcctgttaaa
atagcattagaaacaatggcagggaaaggaacagagattggtagaagctttgatgaaatt
gcgagaattatagatggcgttacccataacgaaagactgtcggtttgttttgatacatgt
cacgttcatgatgctggttatgacattgtgaaccaatttgatcatgtacttcatgagttt
gatagtctcattggaaaagaacgtatttcagttattcatattaatgatagtaaaaatgaa
cgtggagcaggcaaagaccgtcacgaaaatcttggatttggatatatcggttttgatgca
ctccataatatcgtgcatcattctgactttgtagacattccgaagattttagaaacaccg
ttcgtaggtaatgatcctaaaaagaaacacgcaccttatcaagtggaaattgaaatgtta
cgagaaggtatttatcgacctgaaatgattgaacaactgaaacagtcttaa
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