Sporosarcina pasteurii: E2C16_06510
Help
Entry
E2C16_06510 CDS
T06007
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03030
DNA replication
spae03430
Mismatch repair
spae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2C16_06510 (holA)
03430 Mismatch repair
E2C16_06510 (holA)
03440 Homologous recombination
E2C16_06510 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spae03032
]
E2C16_06510 (holA)
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_06510 (holA)
Enzymes [BR:
spae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2C16_06510 (holA)
DNA replication proteins [BR:
spae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2C16_06510 (holA)
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2C16_06510 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
RE_XamI
HTH_3
RepB
RepB_primase_C
Motif
Other DBs
NCBI-ProteinID:
QBQ05345
LinkDB
All DBs
Position
complement(1333207..1334229)
Genome browser
AA seq
340 aa
AA seq
DB search
MPNAIWKKIASGQVDAVYLLTGVEHHIFDATIERLKKALPEIDDASIVRFDLEETPVEAV
IEEADTLPFLQDHKLIIANHAMFLSGQDKKRAEVEHNLAVLEQWLENPSPTATVVFIAPY
EKLDGRKRITKKMRDMSTVIEANRLEGKDLLTWIQREAKTNGAHISSVVAQTLMNTVGDN
LLSLATEIRKMATYLGENGEITNDLIEMLVPRTPEMDVFRLTDAYVASNIPKTVSIYHDL
LRSGEEPIMLTSLIAGQIRLMIHVQSLRKKGYQQQQIAKALHVHPYRVKLMLENRRIPNE
SRLLHILKQLADIDYKLKTTSGKRERLLELFFMDSLQQRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgctatatggaaaaaaatcgcttctggtcaagtggatgctgtctatttacta
acgggtgttgaacatcacatattcgatgctacaattgaacgtttaaaaaaggcattacct
gaaattgatgatgcctctatcgttcgatttgatttggaagaaacgcccgtagaagcggtt
attgaagaagcagatacgttgccgtttttacaagatcataaattaattatcgcgaaccac
gctatgtttttaagtggacaagataaaaaaagggcagaagtagaacataatttagctgtg
ttagaacaatggttagaaaatccgtctccaacagcgacagttgtgtttattgcgccttat
gaaaaattggatggtcgtaaacggattactaaaaaaatgagagacatgtcaacggtcatt
gaagcaaatcgcctggaagggaaagatcttttaacgtggattcagcgcgaagcaaaaaca
aatggggctcatatttcatcggttgttgcacaaacgttaatgaatacagtcggagataat
ttgttatctctcgctacagagatacgtaaaatggcaacttaccttggtgaaaacggcgaa
attacgaatgatttaattgagatgctcgtaccgagaactcctgaaatggatgtgtttcga
ctaacggacgcttatgtagcaagtaatattccgaagacggtttctatctatcatgattta
ttgagaagtggagaagaaccgattatgttaacttcgctcattgcaggacaaattcgttta
atgattcatgtacaatcattacgtaaaaaaggctatcaacaacaacaaatcgctaaggcg
ctacatgtccatccgtatcgtgtgaaattaatgttggaaaatagacgaattccgaatgaa
agtcgactgttacatatattgaaacaacttgcagacattgattataaattaaaaacaacc
agtgggaagcgtgaacgtttgctagaattattttttatggattcgcttcagcaacgtcgt
tga
DBGET
integrated database retrieval system
