Sporosarcina pasteurii: E2C16_06630
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Entry
E2C16_06630 CDS
T06007
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2C16_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_06630
Enzymes [BR:
spae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E2C16_06630
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2C16_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA_16
DEAD
UvrD-helicase
UvrD_C
AAA_12
AAA_28
NTPase_1
nSTAND3
AAA
SHOCT-like_DUF2089-C
T2SSE
TsaE
JHBP
Motif
Other DBs
NCBI-ProteinID:
QBQ05368
LinkDB
All DBs
Position
complement(1353229..1355643)
Genome browser
AA seq
804 aa
AA seq
DB search
MESQTEELYIIGRPFVTIFHNADNLFTICKCSITKTNCDYDEKEIVVKGNFPQLAPEEDY
KFIGRLVNHPTYGAQFDVHTFTKEMPGTETGLVQYLSGDLFPGIGAKTASTIVETLGTDA
INKILNDATVLDKVPRLTEERKATLVSVLQQNMGLERTIIQLNEWGFGPKVAMRIYQAYR
EETIELLTENPYRLTEEIEGVGFQRADELGRHLGITGNHPSRIKAAILYTINEVVQSEGH
VYVEGEVALPEVKRMLEMSQSMEIPYSSISQAIIELVEEGKLSAEKQRLYTPSLYFSEIG
FASKIQEIMSNGSEDQFPVSEIRSAIGEVEERLGVNYAETQVAAIEKALHSPAMILTGGP
GTGKTTVIRGFVEVFAELHGLSLDPAEYAKKKEAFPIILAAPTGRAAKRMSESTELPAMT
IHRLLGFTGQQKEEETDREIEGKLVIIDEMSMVDTWLGHQLLKALPKDVQILFVGDQDQL
PSVGPGQVLKDMLESNVIPVVELTEIYRQSAGSTIIEMAHMIKRSEWSTNIVGKTSDRSF
IAASADRILDAVHQIIDNAISKGHSIKDIQVLAPMYKGPAGIDGLNKMIQKMVNPPSSKR
KEVTFGDVVYRIGDKVLQLVNQPESNVFNGDMGEVISIIKANETVDKKELLVVSYDGIEV
TYERKDLNQITLSYCCSIHKSQGSEFPIVIMPIVRAHRKMLKRNLLYTGITRAQKFLILC
GEPEEFKAGILRADELARQTTLQERLNAYGEPHTATDEDSEETLEVEQEEVEKNYELTTD
NILAIDPMIGMAGITPYAYVQDVD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagtcaaaccgaagaactgtatataattgggagaccgttcgttacaatatttcat
aatgctgataatctctttacgatttgtaaatgtagtattacaaaaacgaactgtgattat
gatgaaaaagaaattgttgtaaaaggaaactttccgcaactagctcctgaagaagattat
aaatttattggtagacttgtgaatcatccaacgtacggtgcccagtttgatgtccatact
tttacgaaagaaatgcctggaacagaaacgggacttgttcagtatttatcgggtgacttg
tttccaggaattggggcgaaaactgcttccaccatcgttgaaacacttgggacagatgcc
attaataaaatattaaatgatgcaactgttttggataaagttccccgtttaacagaagaa
cggaaggctacccttgtctctgttttgcaacaaaacatgggattagaacgaacgattatt
cagttgaatgaatggggcttcggaccgaaagtagccatgcgaatctatcaagcgtaccgt
gaagaaacaattgaactattaactgaaaatccataccggttgacagaggaaattgagggc
gtcggttttcaacgggccgatgaactcggtcgacacttagggataacaggcaatcaccct
tctagaattaaagctgccattttatatacgattaatgaagttgtgcaatcggaaggacat
gtgtatgtagaaggggaagtcgctttacctgaagtaaagcgcatgcttgaaatgagtcaa
tctatggaaattccctatagtagtatttcacaagcgatcattgaactcgtagaagaggga
aagttatctgccgaaaaacaaaggctatacaccccgtcattatatttttcggaaataggc
tttgcgtcaaaaatacaagaaattatgagtaatgggtctgaagatcaatttccagtttca
gaaatccgttcagcaatcggtgaagtggaagagcgtcttggcgtcaattatgcggaaaca
caagtagctgctattgaaaaagcgctccattcacccgcgatgattttaacaggtggtcca
ggtacagggaagacaacggtaattcgagggtttgtggaagtttttgcggaacttcatggt
ttgtctttagatccagcagaatatgcaaaaaagaaagaagccttcccgattattttagcc
gctccgactggaagagcagcgaaacggatgtccgaatcgacggaactacctgcgatgaca
atccatcgtctactcggtttcacaggccagcaaaaagaagaagaaaccgaccgagaaatc
gaagggaaactcgtcattatcgatgaaatgtctatggtcgatacatggctaggccaccag
cttttaaaagcactcccaaaagacgtacaaattttatttgtcggtgaccaagatcaattg
ccttccgtcggaccaggtcaagtgctaaaggatatgttggaatctaacgtgattccagta
gtcgaactaacagaaatttatcgtcaaagtgcaggctccacaattattgaaatggcccat
atgataaaacgttcagagtggtctactaacatcgttggtaaaacatctgaccgttctttt
atagcagcaagtgcggaccggattttggatgccgtacatcaaattatcgataatgcaatt
tcgaaagggcatagcataaaagatatccaagtgttggcgccgatgtataaaggtcctgca
ggcattgacggcttaaataaaatgattcaaaaaatggtgaatcccccgagctctaaacga
aaggaagtaacatttggagacgttgtttaccggataggcgacaaagtgcttcaacttgtc
aatcaaccggaaagcaacgtgtttaacggcgatatgggggaagttattagcattattaaa
gcaaatgaaacggtcgataaaaaagaactacttgtcgtctcttatgatggcatcgaagtg
acctatgaaagaaaagacttaaatcaaattacactttcttattgttgctccattcataag
tcacaaggaagcgaatttccgattgtcattatgccaatcgtgcgtgctcaccggaaaatg
ttaaaacgtaatcttctttatacaggaattacacgtgctcaaaagtttttaattctttgc
ggtgaaccagaagagtttaaagcaggtattttaagggcagatgaactcgcccgccaaacg
accttacaagagcgtttaaacgcatatggtgaacctcatactgctacagatgaagatagt
gaagaaacgcttgaagttgagcaggaagaagtagaaaaaaattatgaactaacgaccgac
aatatccttgcgattgacccgatgatcggaatggctggtattacgccatatgcatacgta
caggatgtcgattga
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