Sporosarcina pasteurii: E2C16_07560
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Entry
E2C16_07560 CDS
T06007
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2C16_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spae03019
]
E2C16_07560
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_07560
Enzymes [BR:
spae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2C16_07560
Messenger RNA biogenesis [BR:
spae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2C16_07560
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2C16_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QBQ05532
LinkDB
All DBs
Position
complement(1549970..1551406)
Genome browser
AA seq
478 aa
AA seq
DB search
MDIYTTLKEKFGFEQFRPGQEEVIRDVLAKNDQIAILPTGSGKSLCFQLPAYLMDGTVVI
ISPLVALMEDQVAILKQQGEKRVVALNSFHTYQERSRMINQLEWYKFIFISPEMLTVPAV
ANKMKKLKIAFIVVDEAHCISQWGFDFRPDYLRVSEFLHAVKNPTVLALTATADRKVIQD
IQHYLNLINPVLHKKSLDRPNISYTIHELTSEQAKTDWLIDRVEQTTGPGIIYVGSRKRA
DELAQVLNELIGGVSSYHAGMEQEDRAFVQAQFISGDLNWICATNAFGMGIHKNDVRQVI
HEHIPSTIANYMQEVGRAGRDGECSAASLLYTIEDIQKTRFIMYDDYPDEGEIRYFANCL
AETKSVHEAAELARLSETGRRMLLYYFERMSVEETIIQINKQSQEKERQLQQMVDLIQAR
TCIRVKLLQNFGEDLQKKPKTCCSICDTTSVDWLYSKDARQDERGWGDWSTRLTNLLG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtggacatctatacaaccttaaaagaaaagttcggctttgaacagttcagacctgggcaa
gaagaagtgatccgcgatgtacttgctaaaaatgaccaaatcgccatattaccaacagga
agtggaaagtcactttgctttcaattgcccgcatatttaatggacggaactgtggttatt
atttcaccgctcgttgccctaatggaggatcaagtcgccattttgaaacaacaaggtgaa
aagcgggttgttgcgcttaattcattccacacctatcaagaacgcagtcggatgatcaat
caacttgaatggtataaatttatttttatatctccagagatgctaacagttccagctgta
gcaaataaaatgaaaaagttaaaaatcgcatttatcgttgtcgatgaagcacattgtatt
tcacaatggggatttgattttaggccagattatttaagggttagtgagtttttgcatgcg
gtaaaaaatccaaccgtccttgcgttaacagctactgcagatcgtaaagtgattcaagat
atacagcactatttaaacttaataaaccctgtactccataaaaagtctctagatagaccg
aatatttcttatacaatacacgaactaacatcagaacaggcgaaaacggattggctgatc
gatcgtgtagaacaaacgactggtccgggtattatttatgtaggttcaagaaaaagagca
gatgaattggctcaagtattaaatgagttgataggaggagtatcttcttatcatgcgggt
atggaacaagaggatcgtgcttttgtccaagcgcaatttattagtggtgatttgaattgg
atatgtgctacgaatgcatttgggatgggaatacataaaaatgacgtcagacaagtgatt
catgaacatatcccgtctaccatcgcaaattatatgcaagaggttgggcgagcgggaagg
gacggggaatgctcagcggcatctttattatatacaatagaggacattcagaaaacgagg
tttattatgtatgacgactatccggatgaaggggagattcgttattttgctaattgtcta
gccgaaacaaagtccgttcacgaggcggctgagttggcaaggctaagtgaaacaggtaga
cgaatgttgctttattattttgaacggatgtcggtggaggaaacaatcatacaaataaat
aaacaaagtcaggaaaaggaacggcagttacaacaaatggttgacctcatccaggcgcgg
acatgtatccgtgttaaacttcttcagaattttggagaagatttacaaaagaaacctaaa
acttgctgttcgatctgtgatacaacttctgttgattggctttacagcaaggatgcgcga
caggacgaaagagggtggggcgattggtcaacaagactaacgaatcttcttggttag
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