Sporosarcina pasteurii: E2C16_08445
Help
Entry
E2C16_08445 CDS
T06007
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03030
DNA replication
spae03430
Mismatch repair
spae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2C16_08445
03430 Mismatch repair
E2C16_08445
03440 Homologous recombination
E2C16_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spae03032
]
E2C16_08445
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_08445
Enzymes [BR:
spae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2C16_08445
DNA replication proteins [BR:
spae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2C16_08445
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2C16_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
Rv2179c-like
HHH_3
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QBQ05695
LinkDB
All DBs
Position
complement(1730004..1734329)
Genome browser
AA seq
1441 aa
AA seq
DB search
MDGKQNDKMKLHLLLQQINMTDDQFVVHFKNALLERVSVHRKSRVWQFNIQLEKLLPIEV
YTIFNQRIREAFSAIATIQLNIVCKNPVVDESLIAGYWPFVIEELRDMSPPIRERLTSQK
PSVTGGKLTFICMNDMELQTMKTKYGPLIADVFETFGFPRLAVDFQLTDDLNSAEEAQKA
FLIERQAEEEEMARKALEDMQKREQSRKENDDVPSGPFQLGPAIKHDEPLMEIRNIQDEE
RSVTIEGYVFDTEVRELRSGRSLLTIKITDYTDSIIVKMFSRNEEDGKLMSSLKKGSWVR
ARGGIQNDTFVRDLIMMAQSIMEIPPVIRRDLAPDDRKRVELHAHTSMSQMDAVVSASAL
VEQAAKWGHPAVAITDHGNVQSFPEAYSAGKKHGIKVLFGMEANLVDDGVPIAYGEQHRK
LEDDTFVVFDVETTGLSAVYNTIIELAAVKIKNGEVIDTFERFANPHEPISALITNLTGI
TDDMVKDAPDVDEVVRDYYEWIGDAVLVAHNASFDMGFLYEAYKKAGIPSITYPVIDTLE
LARFLHPELGNHRLNTLAKKYNIELTQHHRAIYDAEATGYLFIKLLEGAEAKGITHLDDF
NKHIGEGDAYKRARPSHCTIIATDDVGMKNLFKLVSYSHMDYFYRVPRIPRSLLIKHRQG
LLIGSGCSNGEVFEGLMQKSPEEVEEIAKFYDYIEIHPKAVYSHLIDMELIRDEWNMEDI
MRKLIKLGKAVDIPVCATGNVHYIDETDATFREVLVRAQGGANPLNRHSLPEVHFRTTDE
MLKEFSFLGEQVAEEIVIDNPRAILERVGDVKPIKDDLYTPEIEGADEEVKQLTYSMAHE
IYGEELPEVVVERIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVAT
MMEITEVNPLPPHYVCPTCKKAEFFDDGSVSSGYDLPDKKCSDCDVLYTKDGQDIPFETF
LGFEGDKVPDIDLNFSGEYQANAHNYTKELFGEDYVYRAGTIGTVAERTAYGYVRGYMND
NGVHFRGAEIDRLVIGCSGVKRSTGQHPGGIIVVPDTKDIFDFTPIQFPANDLNSAWKTT
HFDFHSIENNLLKLDILGHDDPTMIRMLEDLSGIDPLTIPPDDEGVMKLFSGTESLGVTP
EQIGTKTGTLGVPEFGTRFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNAQELIKNKV
CQLSDVIGCRDDIMVYLIYQGLKPATAFSIMESVRRGRGLTPEFEEAMRAQNVPNWYIES
CKKIKYMFPKAHAAAYVLMALRIAYFKVHHPILYYSAYFTVRAADHDLLTVTKGSASIRA
KIQEIDAKGLDASPKEKNLLTVLEIALEMCERGFSFAKPDLYKSDATTFVIDGDTLIPPF
NAIPSLGTNVAQSIVEARKDGEFLSKEDLQQRGRVSKTVIEYMEELGCLEGMPDANQLSL
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
gtggatggtaaacaaaacgataaaatgaaactccacctcttattacaacaaataaatatg
acagacgatcaatttgttgttcattttaaaaatgcattattagagagagtaagcgttcat
cgtaaatcacgcgtttggcaatttaatatccaattagagaaattactgccaatcgaagta
tatacaatctttaaccagagaatacgagaagcattttcagcaattgctacaattcaatta
aacatcgtttgtaaaaatccagtagtggatgaatcgttaattgctggttattggcccttt
gtaatagaagaattacgagatatgtcaccgcctattcgtgaacgattaacgagtcaaaaa
ccgagcgttacaggtggtaaactcacattcatctgtatgaacgatatggaattacagacg
atgaaaacaaaatatggcccactaattgctgacgttttcgaaacgtttggctttccaagg
cttgccgttgattttcagctaactgatgatttgaacagtgctgaggaagcacaaaaagct
tttctaatcgaacgtcaggcagaagaggaagagatggctcgaaaagcgttagaagacatg
caaaagagagagcagagccgtaaagaaaatgacgatgttccatcgggtccattccaatta
ggtcctgcgattaaacatgacgaaccgcttatggaaatcagaaacattcaagatgaagag
cgtagcgttacaatcgaaggctatgtctttgatactgaagtaagagaattacgtagcggt
cgttcattattaacaatcaaaataacagattacacggactccattattgtcaaaatgttt
tcccgtaatgaggaagatggtaaattaatgtcctccttgaaaaaaggttcatgggttcga
gcgcgtgggggcattcaaaatgatacgttcgttagagatttaattatgatggcacagtcg
attatggaaatacccccagttattcgaagagacttagcgcctgatgatcgtaagcgtgtg
gaattacatgcacatacatcgatgagtcaaatggatgcagtcgtttcagcttcagcatta
gtcgagcaagcagcgaagtgggggcatcctgctgtagcgattacagaccatggcaacgtg
cagtctttccctgaagcttattctgctgggaaaaagcatgggataaaagtattgttcggg
atggaagccaatttagtcgatgatggagttccaattgcgtacggtgaacaacatcgtaaa
cttgaagatgatacgtttgttgtatttgacgtagaaacgactggactctcagctgtttat
aataccattatcgaattggctgctgtgaagattaaaaacggtgaagtcattgatacgttt
gaacgatttgcaaatccgcacgaaccaatctctgccctcattacgaatttgacagggatt
acggatgatatggtaaaagatgctccggatgtcgatgaagtcgttcgagactattatgag
tggataggtgacgcggtactcgttgcacataacgcatcatttgatatgggattcttatat
gaagcttataaaaaagcaggaattccaagtattacgtatccagttattgatacattagaa
ctggcacgttttctacatcctgaactcgggaatcacagactgaatacgttagcgaaaaaa
tacaatattgaactgacgcaacatcaccgtgcgatttacgatgcggaagcgactggatat
ttgtttataaaattgttagaaggtgcagaggcaaaagggattacgcatttagatgatttt
aataaacatattggagaaggcgacgcttataaacgtgctagaccgtcccactgtacaatt
attgcgacagacgatgtcgggatgaaaaatttatttaaactcgtatcttattcgcatatg
gattatttttatcgggtgccgcggattccgcgttctttactcattaaacaccgacaaggg
ttactcattggatctggttgttcgaacggtgaagtatttgaagggctcatgcagaaatcg
cctgaagaagttgaagaaattgcgaagttctatgactatattgaaattcatccgaaagct
gtgtattcacatttaattgacatggaactaatccgtgatgaatggaatatggaagatatt
atgaggaagttaattaaacttggaaaagctgtcgatatccctgtttgtgcaacgggaaat
gtgcattatatcgatgaaacggatgcgacgtttagggaagttctcgttcgcgctcaaggc
ggggcaaatcctttaaaccgacattccttaccagaagttcattttcgtacgactgatgaa
atgcttaaagagttttcatttctcggggaacaggtggcagaagaaatcgtcatcgacaat
ccacgcgcgatattagaaagagtcggggatgttaagccgataaaagatgatttatatacg
cctgaaattgaaggtgcagatgaagaagttaagcaattaacttattccatggcgcatgaa
atttatggcgaagagttaccagaagttgtcgttgaacggattgaaaaggaactgaaatcc
attattggacacggcttcgcagtcatttatttaatttcccataagctagtgaaacgttca
ctcgatgatggctatttagttggatcgaggggatccgttggttcttcacttgttgctacg
atgatggaaattacggaagttaacccacttccaccgcattatgtttgtccgacttgtaaa
aaagcggagttcttcgatgacggttccgtaagttcgggttatgacttacctgataaaaaa
tgttcagattgtgatgtattgtatacaaaagatggacaagatatcccgtttgaaacattc
cttggtttcgaaggggacaaggtacctgatattgatcttaacttcagtggagaataccaa
gcaaatgcgcataactatacgaaggaattattcggagaagattatgtctatcgtgctgga
acaattggtactgttgcagagcgtacagcctatggttatgtcagagggtatatgaatgat
aatggtgttcatttccgtggcgctgaaattgaccgcctcgtaatcgggtgttcaggtgtt
aaacgaagcactggacaacacccggggggaatcattgttgtaccggatacaaaggatatc
tttgactttacaccaattcaattcccagcaaacgatttaaattcagcatggaaaacgacg
cactttgatttccattcgatagaaaataacttgttaaaactagatattctcggtcatgat
gatccaacaatgattagaatgctcgaagatttatcggggattgacccacttacaattccg
cccgacgatgaaggcgtgatgaaattatttagtggcactgaatcgcttggcgttacacca
gaacagattggtacaaaaacaggaactcttggtgtaccagagttcggaacgcgtttcgtt
cgtcaaatgcttgaagagacgaaaccaactacattctcagaactcgttcaaatttctgga
ctctctcacgggacagacgtttggcttggaaatgcccaagagttaattaaaaataaagtc
tgtcagctatctgacgtaatcggttgtcgtgatgacattatggtttatttaatttaccaa
gggctaaaacctgcaactgcctttagtattatggagtccgttcgtagaggtcgcgggcta
acacctgaatttgaagaagcgatgagagctcaaaatgtaccaaattggtatattgaatca
tgtaaaaagattaaatatatgttcccgaaggcgcatgctgctgcatatgtattaatggca
cttcggatagcttattttaaagtgcatcatccaattctttattattcagcatactttaca
gttagagctgctgatcacgatttactaacagtaacaaaaggttcagcatctattcgtgct
aagatccaggaaattgatgcaaaaggcctcgatgcatcaccaaaggagaaaaatttactt
actgtattggaaattgcgttagagatgtgtgaacgtggattttcatttgcaaaacctgat
ttatataagtcggatgcaacgacgtttgtcattgatggagatacattaatccctccattt
aatgcaatcccatcgctcggtacaaatgttgcgcaatcaattgtcgaagcgagaaaagac
ggtgagttcctatccaaggaagatttacagcagcgaggtcgtgtttcaaaaacagtcatc
gagtatatggaagaacttggctgtctagaaggaatgcctgacgcaaatcaattgtcgttg
ttctaa
DBGET
integrated database retrieval system
