Sporosarcina pasteurii: E2C16_09770
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Entry
E2C16_09770 CDS
T06007
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spae
Sporosarcina pasteurii
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spae03400
]
E2C16_09770 (addB)
Enzymes [BR:
spae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2C16_09770 (addB)
DNA repair and recombination proteins [BR:
spae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E2C16_09770 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QBQ05939
LinkDB
All DBs
Position
complement(2002405..2005896)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSLRLITGRSGSGKTQFIQSEIAEMLKQDPLGTPVFVIVPDQMSFSMEHSLSVNYGLAGI
IRAQVVTFKRLAWRILQETGGITRKEVDGFGYRMLVRSVLEENQNEFKVFKQAASKRGFT
EQIGDLMKEFSRYCLDFETMNELVNELQSAGSPQILLDKASDLSLLLTKIEEKLGTSYVD
SEGHLALLASQIKHADIVKGAHIYIDGFENFTTREYEIITELMKYGGRVTVVLPMEADLL
GHADHDLFFNSVRTYEQIRSLARAESVEEEETVHFTEAKRFKTKDLLHLEATFEQYPAIG
MEAEGDVSIIEASDPRAEIHAVARTIRQLTMEGKRYKNIAILYREPEKYDVLLETIFPHY
DIPVFISRKKPMLHHPLIEFSRSVLEAMTSGWSFESIFRAVKTDLFFPHGENVELWRERA
DRLENYVLAHGIMGSRWFDEKRWRVKRYRGLELHTDVQTDKELALEKEIHLIRDVIRTPL
EKFEKRLRHAKHGQAVAEALFALVEELRVYDKIIDLRAEEERAGRLLGATEHEQAWNEWI
QVLDQFVLMFGDKEMRLTEATKILDEGFDSLEFTRIPPSLDQVTVSTIELSNLMNTDAVF
VLGVNEGVLPQRVDNEGILSDADREWFAGIGFELAPTSKMKLMDESYMAYRAFTSAREKL
YVSYPIADEEGKALIPSLYIARIEQILTNCTVIQATLDPFDVSADGDNFQYISHPRATLP
FAAIKLKEAARHIEITKEWQAVLAYYRQDMLWKPVLGRISRPMIKGNQTDRLQPEMTAGL
YGESFVTSVSRIESYYSCPFQHYASFGLKLEERSEYTLEAPAIGDLFHAALKWVSDEIMR
LGKSWDSLTKEECWQVARQAVEEITPYFFNRILLSTSRYMYIKRKLVQIIQRTIYSLSTQ
SKSTVFKPVAIEAGFGPGEQLPSLEIPLRSGQSMKLRGRIDRIDTTEIKGRNYLRVVDYK
SSARDLELAEVYYGLSLQMLTYLDVALEYADELLGFDADPAGILYMHVHNPMIRPGEELS
RELLEAEIAKSYKMRGYLLEHPEVVEGMDINIGNSSAIVPAAFRKDGSFTKRSKVLAPED
LQIMRTYVKSRHQKAGNAMLLGDTRVYPYKLKDRMPCQFCAYRSVCQFDPTDPNQTYRQY
ELLDAETSLEKMREEVAADEHTD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgtttgattacaggtaggtcgggttcagggaagacgcagtttattcaatct
gaaattgcggaaatgctgaagcaagatcctttaggcacacctgtttttgttattgtgcct
gatcaaatgtctttttctatggaacatagtttatcagtaaactatggtttggctggcatt
attcgtgctcaagttgtgacgtttaaacgacttgcgtggcgaatcttacaagaaaccggg
ggcattacgcgtaaagaggtcgatggatttggctaccggatgcttgtccgaagtgtgtta
gaagaaaatcaaaatgaatttaaagtttttaagcaagctgctagtaaaagagggtttacg
gaacaaataggcgacttgatgaaagaatttagtcggtattgtctcgattttgagacgatg
aacgagctagtcaatgaattacaatcggcaggttcaccgcaaatcttgctggataaagca
agtgatttatcgttattgcttactaaaatcgaagaaaaacttggtacttcttatgtggat
agtgaagggcatttagcattgcttgcttctcaaattaaacatgcggacatcgttaaaggg
gcgcatatatatattgacggttttgaaaatttcacgacacgtgaatatgagattattacg
gaacttatgaaatacggcggtcgggttacggttgtcttgccaatggaagcggatttgttg
gggcacgcggatcatgatttgtttttcaattcagttcgaacgtatgaacaaattcgaagc
ttagcacgagcagaatcagtagaagaagaggaaaccgttcattttacagaggcaaagcga
tttaaaacaaaggaccttttacatttagaagctacatttgaacaatacccggcaattgga
atggaggcagagggagatgtttcaattattgaagcatcagatccacgtgctgaaatccat
gcagtagcgagaacgatccgtcaattaacgatggaaggcaaacgatataaaaatatcgcg
atcttgtatcgtgaaccggaaaagtatgatgttttattagaaacgatttttccacactat
gatatccccgtatttattagccggaaaaagccgatgttgcatcatccgttaatcgaattt
tctcgttcggtattggaagcaatgacttcgggttggtcattcgaatcgatttttcgagct
gtgaaaacagatttatttttcccgcatggtgaaaatgtagaactttggagagaacgagcg
gatcgacttgaaaactatgtgttagcgcatggaatcatggggtcaaggtggtttgatgaa
aaacgttggcgtgtgaaacgatatcgcgggcttgaattacatactgacgttcagaccgat
aaagagttagctttagaaaaagaaatacatctcattcgtgatgtcattcggacgccactc
gaaaagtttgagaaacgactgcgacatgcgaaacatggtcaagcagttgcggaagcgttg
tttgctctagtggaagaacttcgtgtctatgataaaattatcgatttacgagcagaagaa
gaacgcgctggccgactcttaggtgcaacagaacacgaacaggcatggaatgaatggatt
caagtattagaccagtttgtgctcatgttcggtgataaggaaatgcgacttactgaagcg
actaagatattagatgagggatttgattcgttagaatttacgcgtattccaccgtcgctt
gatcaagtgaccgtttcaacgattgaactctctaatttaatgaatacagatgcagtgttt
gtgttaggtgtgaatgaaggcgtcctgcctcaaagggtggataatgaaggaatcttatca
gatgcggaccgcgaatggtttgccggaattggtttcgaattagcaccgacgtcgaaaatg
aaattgatggatgaatcctatatggcttaccgtgcatttacttcagcacgtgaaaaatta
tatgtgtcttatccgattgctgacgaggaaggtaaagcactcataccgtcgttatatatt
gcaagaatcgaacaaatattgacgaattgcacggtcatacaggcaacattggatccattt
gacgtatcagcggatggagacaatttccaatatattagtcatccgcgtgcaacattacct
ttcgctgccattaagctaaaagaagcagcacgtcatatagagattacgaaagagtggcaa
gcagtactcgcttactataggcaagatatgttatggaaaccagtactcggtcgaattagt
cgcccaatgattaaaggcaaccaaacagaccgattacaaccagaaatgacagctggttta
tacggagagtcatttgtgacaagcgtttcacgtattgaatcttattatagttgtccgttt
caacattatgcttcgtttgggctgaagctcgaagaacggtccgaatatacgttagaagcc
ccggcgattggcgatttatttcacgcggccttgaaatgggtgtctgatgaaattatgcgt
cttgggaaatcatgggattctttaacgaaagaagaatgttggcaagtagccagacaggca
gtcgaggaaatcaccccgtatttcttcaatcgtattttattgtcaacaagtcggtatatg
tacattaagcggaagctcgttcaaattattcaacgtacgatttattcattaagtacacaa
tcaaaatcgacggtatttaaaccagtcgccattgaagccgggtttggaccaggtgaacaa
ttaccatcactggaaatcccacttcgaagcgggcaatcaatgaagttacgtggccgaatt
gatcgcatcgatacgactgaaattaaaggtagaaattatttacgtgtggtggattataaa
tcgtcggcaagggatctagaacttgctgaagtatattatggactatccttacaaatgttg
acctatttagacgttgcactggaatatgcagatgaactactagggttcgatgcagacccg
gccgggattttatatatgcacgtccataatccgatgattcgaccgggagaagaattgtcg
cgtgaactgttagaggcggaaattgccaagtcttataaaatgcgtgggtatttattggaa
catccagaagttgtcgaagggatggacatcaatataggaaattcgtccgcgattgtgcct
gctgcttttcgaaaagatggttcatttacgaaacgatcgaaagtcttggcgcctgaggat
ttacaaataatgcgcacgtatgtgaaatcgagacatcaaaaagctggaaacgcaatgtta
cttggcgatacacgtgtgtatccatataaattaaaagatcgtatgccttgtcaattttgt
gcctatcgttcggtttgtcagttcgatccgactgatccgaaccagacatatcgacaatat
gagctactcgatgctgaaacgtcgttagaaaaaatgcgtgaggaggtggcggccgatgaa
cataccgattaa
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integrated database retrieval system
