Sporosarcina pasteurii: E2C16_15100
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Entry
E2C16_15100 CDS
T06007
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2C16_15100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spae03019
]
E2C16_15100
03009 Ribosome biogenesis [BR:
spae03009
]
E2C16_15100
Enzymes [BR:
spae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E2C16_15100
Messenger RNA biogenesis [BR:
spae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2C16_15100
Ribosome biogenesis [BR:
spae03009
]
Prokaryotic type
rRNA helicases
E2C16_15100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_30
GRP
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QBQ06884
LinkDB
All DBs
Position
3128096..3129598
Genome browser
AA seq
500 aa
AA seq
DB search
MTKFSELNISESTQRSLARMGFEEATPIQEGTIKLGLEGRDIIGQAQTGTGKTTAFGVPI
IENIDTSNRSIQALVIAPTRELAIQVSEELYRIGNDKRAKVLSVYGGQDISRQIRALRNN
PQIIVGTPGRLLDHIKRKTIKLDNVQTLVLDEADEMLNMGFIEDINAIMAAVPEERQTLL
FSATMPAPIRKIAETFMKEPEVVKIKSKAMTVENIEQFFVKAQEREKFDILSRVLNVHQP
ELAIVFGRTKRRVDELSHALTIRGYLAEGIHGDLTQAKRMSVLRQFKEGKIDILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKNGVAVTFVTPREMGYLRIVEETTK
KRMTPLVPPTSDEALLGQQRLAVEQLTEIIQKNELHDYKQLASNLLKDHDALEVVAAALK
NMTREPDDTPVKITEERPLPSRNNRRGDRGGYKGNRGGGRRPARGGGSRSRDGRGGGGGS
RRGREGGNRGRGRSRRPSES
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaattttcagagctaaatattagcgaatcaacacaacgctctttagcccgcatg
gggtttgaagaagcaacacctatccaagaaggtacaattaaacttgggttagaaggacga
gacattatcggtcaagcacaaacagggacggggaagacgactgcatttggtgttccaatt
atcgagaacattgatacaagtaaccgttcaattcaagcacttgtaattgcgccaacacgt
gagttagcaattcaagtttcagaagaactataccgaatcggaaacgataaacgtgcgaaa
gttttatctgtttacggtgggcaagatatcagtcgacaaattcgtgcgctgcgcaacaac
ccacaaattattgtcgggacgccaggacgtttacttgaccatattaaacgtaaaacaatt
aaattagacaatgttcaaacattagtattagacgaagcagatgaaatgctaaatatgggc
ttcatcgaagacattaatgcgattatggcagctgttccggaagaacgtcaaacattattg
ttctcagcaacaatgcctgcacctattcgtaaaattgcagaaacgtttatgaaagaacca
gaagtcgttaaaattaaatcaaaagcaatgaccgtagaaaatattgaacagttctttgta
aaagcacaagaacgcgaaaagtttgatattctttcacgcgtattaaacgttcatcagcct
gaattggcaattgttttcggacgtacgaaacgtcgtgtcgatgaactttcccatgcactt
acaatccgcggttatctagcggaaggaatccatggtgatttaacacaagcgaaaagaatg
tcagttcttcgtcagtttaaagaaggaaaaattgatatcttagtggcaacagacgttgcg
gcacgtggattagatatttcaggtgtcacacatgtttataactttgatattccacaagat
cctgaaagttacgttcaccgtatcgggcgtacggggcgtgctgggaaaaatggtgtagct
gttacattcgtaacgccacgtgaaatgggttacttacgaatcgttgaagaaacgacgaaa
aagcgtatgacgccattagttccgccgacttcagacgaggcgttattaggtcaacagcgt
cttgcggttgaacaattaactgaaattattcagaaaaacgaacttcatgattataagcaa
cttgcatcaaacttattgaaagatcatgacgcattagaagttgtggcagcagcgctgaaa
aacatgacgcgcgagccagatgacacacctgttaaaattacagaagaacgtccacttcca
tccagaaataaccgacgtggtgaccgcggaggttataaaggaaatcgtggcggcggtcgt
cgtccagcacgtggtggcggtagtcgtagtcgtgacggacgtggtggcggtggcggatca
cgtcgcggtcgcgaaggtggaaatcgcggcagaggtcgttcaagacgtccatctgaatca
taa
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