Sporosarcina pasteurii: E2C16_15300
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Entry
E2C16_15300 CDS
T06007
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spae
Sporosarcina pasteurii
Pathway
spae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2C16_15300 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spae03019
]
E2C16_15300 (groL)
03110 Chaperones and folding catalysts [BR:
spae03110
]
E2C16_15300 (groL)
03029 Mitochondrial biogenesis [BR:
spae03029
]
E2C16_15300 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spae04147
]
E2C16_15300 (groL)
Enzymes [BR:
spae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E2C16_15300 (groL)
Messenger RNA biogenesis [BR:
spae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E2C16_15300 (groL)
Chaperones and folding catalysts [BR:
spae03110
]
Heat shock proteins
HSP60 / Chaperonin
E2C16_15300 (groL)
Mitochondrial biogenesis [BR:
spae03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E2C16_15300 (groL)
Exosome [BR:
spae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E2C16_15300 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E2C16_15300 (groL)
Exosomal proteins of breast cancer cells
E2C16_15300 (groL)
Exosomal proteins of colorectal cancer cells
E2C16_15300 (groL)
Exosomal proteins of bladder cancer cells
E2C16_15300 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QBQ06912
LinkDB
All DBs
Position
3158595..3160232
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIKFNEDARSAMQRGVDTLANTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAREIE
LEDKFEDMGAKLVSEVASKTNEIAGDGTTTATVLAQAMISEGLKNVTAGANPVGIRKGIE
KAVAAAIEELTVISKPIEEKESIAQVAAISSGDEEVGTLIADAMERVGNDGVITIEESKG
FTTELDVVEGMEFDRGYASAYMATDTDKMEAVLDNPYILITDKKITNIQEILPVLEQVVQ
QGKPILLIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGEVIT
EDLGLDLKETQITQLGTAAKVVVTKDHTTIVEGAGDAAQIEGRVNQIRTQLEDTTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALINV
YKKVEELNETETGDVATGVNIVLRALEEPVRQIANNAGLEGSIVVDRLKREEIGIGFDAA
EGDWVNMMEAGIVDPTKVTRSALQNAASVASMFLTTEAVVANLPEENAGGGMPDMGGMGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaatttaacgaagatgcacgtagcgcaatgcaacgtggtgttgat
acattagcgaatacagtaaaagtaacacttggaccaaaaggacgtaacgttgttcttgag
aaagcgtttggttctccattaattacaaatgatggcgtaacgattgctcgtgaaatcgag
cttgaagataaatttgaagatatgggtgcaaagcttgtttctgaagttgcatctaaaaca
aacgaaattgctggtgatggaacgacaacagctacagttctagcgcaagcaatgattagc
gaaggacttaaaaacgtaactgcaggggcaaacccagtaggtatccgtaaaggaattgaa
aaagcagttgcagcagcaattgaagagctaactgtaatttctaaaccaattgaagaaaaa
gagtcaattgcacaagttgcagcgatttcttcaggtgatgaagaagtaggtacgttaatt
gcagatgcaatggagcgtgttggcaacgacggtgttatcacaattgaagaatcaaaaggc
ttcacaactgagctagacgttgttgaaggtatggagtttgaccgtggttatgcatcagca
tacatggcaacggatacagacaaaatggaagctgtattggacaacccttacattttaatt
acagataagaagattacaaacatccaagaaatcttaccagttcttgagcaagttgttcaa
caaggtaagccaatcttactaatcgctgaagacgttgaaggtgaagcgcttgcaacactt
gttgtaaacaaacttcgcggaacgtttaacgcagtagcggttaaagcacctggattcggt
gaccgtcgtaaagcaatgcttgaagacatcgctatcctaacaggtggagaagtgattact
gaagatttaggtttagatctaaaggaaacacaaattacacaacttggaacagcggcgaaa
gtagttgtgacaaaagaccatacaacaattgttgaaggtgctggagacgcagctcaaatc
gaaggccgtgtgaaccaaatccgtacacaacttgaagatacaacttctgagttcgacaag
gaaaaacttcaagagcgtcttgcaaaactagcaggtggagtagcagtaattaaagtaggt
gcagcaactgaaactgagttgaaagagcgtaaacttcgtatcgaagacgcattaaactca
acacgtgcagcggtagaagaaggaatcgtttcaggtggaggtacagcgctaatcaacgtt
tacaagaaagttgaagagcttaacgaaactgaaactggtgacgtagctacaggtgtaaat
atcgttctacgtgcactagaagagccagttcgtcaaattgcgaacaacgctggccttgaa
ggttcaatcgttgtagaccgtctaaagcgcgaagaaatcggcattggtttcgatgcagct
gaaggcgactgggtaaatatgatggaagctggtatcgtggatccaacaaaagttacacgt
tcagcactacaaaacgcagcatctgttgcatctatgttcttgacgacagaagcagttgtc
gcaaacctgcctgaagaaaacgcaggcggcggaatgccagatatgggcggcatgggcggc
atgccaggaatgatgtaa
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