Sphingomonas paludis: ACPVPU_02870
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Entry
ACPVPU_02870 CDS
T12015
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
spaf Sphingomonas paludis
Pathway
spaf00740
Riboflavin metabolism
spaf00790
Folate biosynthesis
spaf01100
Metabolic pathways
spaf01110
Biosynthesis of secondary metabolites
spaf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
ACPVPU_02870 (ribB)
00790 Folate biosynthesis
ACPVPU_02870 (ribB)
Enzymes [BR:
spaf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
ACPVPU_02870 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
ACPVPU_02870 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
HTH_Tnp_1
HTH_26
Motif
Other DBs
NCBI-ProteinID:
YBU91573
LinkDB
All DBs
Position
596145..597434
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AA seq
429 aa
AA seq
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MSTDLIARIRKLVLDGGMSRSGLARAAGLHANTLRDLDQPDWNPTADTLRKLEAFAFAND
DSPVLVPIEEIIDEARNGRMFILVDDEDRENEGDLVIPAQMATPAAINFMATHGRGLICL
ALAKDRVDQLGLDLMSRANGTRHATAFTVSIEAKSGVTTGISAADRARTISVAIDASKGP
DEIVTPGHVFPLVAREGGVLVRAGHTEAAVDVSRLAGLNPSGVICEIMKDDGTMARMDDL
IPFARLHKLKMGTIRDLIAYRRRHDHLVERRAETSFTSRWGGEWRLITFWNKGAGTEQVA
LIKGRIDPARPTLVRMHALSPFGDLFGEAGDRGALLQRSMQIIGEEGAGVIVVINKPRAD
AFTLAVEHRAGIRRPAEMEELRDYGVGAMILTDLGVEEMVLLTNTHHTLVGLDGYGLSIV
GERPIDLDA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgatctgattgcccgtatccgcaagctggtgctggacggcggcatgtcgcga
tccgggctggcccgcgccgccgggcttcacgccaacaccctgcgcgatctggatcagccc
gactggaaccccaccgccgacacgctgcgcaagctggaggcgttcgccttcgccaatgac
gattccccggtgcttgtgccgatcgaggagatcatcgacgaggcgcgcaacggccgcatg
ttcatcctggtggatgacgaggaccgggaaaatgagggcgatctggtcatcccggcccag
atggcgacccctgcggcaatcaatttcatggcgacgcatggccgcggcctgatctgcctg
gcgctggccaaggaccgggtcgaccagctcggcctcgatctgatgagccgggccaacggc
acccgccacgccacggcctttaccgtgtcgatcgaggcgaaaagcggcgtcaccaccggc
atttccgccgccgatcgtgcccgcaccatttccgttgcgatcgacgcgtcgaaggggccg
gacgaaatcgtgacgccgggccatgtctttccgctggtcgcgcgcgagggcggggtgctc
gtccgcgccggccataccgaggcggcggtcgatgtctcgcggctggctgggctcaacccg
tctggcgtgatctgcgagatcatgaaggatgacggcaccatggcccgcatggacgacctc
attcccttcgcgcggctacacaagctcaagatgggcacgatccgcgacctgatcgcctat
cgccgccgccacgatcacctggtcgaacgccgcgccgaaaccagcttcaccagccgctgg
ggcggggaatggcggctgatcaccttctggaacaagggggcgggcaccgaacaggtggcg
ctgatcaaggggcggatcgatccagcccggccgacactggtgcggatgcacgccctgtcg
ccgttcggcgacctgttcggcgaggcgggggatcgcggcgcgctgctgcagcgctcgatg
cagatcatcggcgaagaaggcgcaggcgtcatcgtcgtcatcaacaagccgcgtgccgac
gccttcaccctggccgtcgaacaccgggccggcatccggcgcccggcggagatggaggaa
ttgcgcgactacggcgtcggcgccatgatcctgaccgatctgggggtggaggaaatggtg
ctgctgaccaacacgcatcacactttggtcgggctcgacggctatggcctgtccatcgtc
ggtgaacggccgatcgatctggacgcctga
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