Sphingomonas panacisoli: FPZ24_00860
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Entry
FPZ24_00860 CDS
T07288
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spai
Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spai03016
]
FPZ24_00860 (truB)
Enzymes [BR:
spai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FPZ24_00860 (truB)
Transfer RNA biogenesis [BR:
spai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FPZ24_00860 (truB)
Prokaryotic type
FPZ24_00860 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDZ06200
UniProt:
A0A5B8LGF7
LinkDB
All DBs
Position
174903..175865
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AA seq
320 aa
AA seq
DB search
MHGWIILDKPLELGSTQGVSAVKRALRQGGYRKLKVGHGGTLDPLATGVLPIAIGEATKL
AGRMLDSDKVYDFTVAFGVETDTLDLEGKAVAESDVRPSMMAIDAVLPQFTGAIDQVPPA
YSALKVDGERAYDLARAGEDVELKCRSVTVYSLVRHPRESGGLSPVLSNARHGDEMGPRF
RGDDEVMDSVTLTAHVSKGTYIRSLARDIARALGTVGHVTYLRRIKAGPFDLSHAISLDK
LDEAAKGRTLEQHLLPLRAGLDDIPALALDPDQAGALRQGRVLAGIAEDDGLHFATLGDT
PVALVVVTSGEARVVRGFNL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgcatggctggatcatcctcgacaaaccgctcgagctcggctcgacgcaaggcgtgagc
gcggtcaagcgtgcgttgcgtcaaggtgggtataggaagctaaaagtcgggcacggcggc
acgctcgatccgctggcgacaggcgtgctgcccatcgcgatcggcgaggcgaccaagctc
gccgggcggatgctcgacagcgacaaggtctacgacttcacagtcgcgttcggggtcgag
acggatacgctcgatctggagggaaaggcggtcgcggagagcgacgtgcggccaagcatg
atggcgatcgatgccgtcctaccgcaattcaccggcgcgatcgaccaggtgccgccagcc
tattcggcgctgaaggtcgatggcgagcgggcgtatgatctggcgagagcgggggaagat
gttgaactgaagtgccgctcagtaacagtctattctttagtccgtcacccccgcgaaagc
gggggcctatctcccgtcctgtccaatgcgcggcacggcgacgagatgggtccccgcttt
cgcggggatgacgaggttatggatagtgtcaccctcaccgcccacgtctccaagggcacc
tacatccgctccctcgcccgcgacatcgcccgcgcgcttggcaccgtcggccacgtcacc
tatctcaggcgcatcaaggccggcccgttcgacctgtcccacgcgatatcgctggacaaa
ctggacgaagccgctaagggccgcacccttgaacaacatctcctgccgctgagggcgggg
ctggacgacatcccggctctcgcgctcgatcccgaccaggcaggggcgctccgtcagggg
cgcgttctggccgggattgccgaagacgatggcctgcacttcgcgaccctgggcgacacg
cccgtcgcattggtggtggtcaccagcggggaagcccgtgtcgtccgcggcttcaaccta
tag
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integrated database retrieval system
