KEGG   Sphingomonas panacisoli: FPZ24_01060
Entry
FPZ24_01060       CDS       T07288                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
spai  Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:spai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spai03019]
    FPZ24_01060 (rnc)
   03009 Ribosome biogenesis [BR:spai03009]
    FPZ24_01060 (rnc)
   03036 Chromosome and associated proteins [BR:spai03036]
    FPZ24_01060 (rnc)
Enzymes [BR:spai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     FPZ24_01060 (rnc)
Messenger RNA biogenesis [BR:spai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FPZ24_01060 (rnc)
Ribosome biogenesis [BR:spai03009]
 Eukaryotic type
  90S particles
   RNase
    FPZ24_01060 (rnc)
 Prokaryotic type
  rRNA processing factors
   FPZ24_01060 (rnc)
Chromosome and associated proteins [BR:spai03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     FPZ24_01060 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: QDZ06235
UniProt: A0A5B8LEN7
LinkDB
Position
complement(214064..214732)
AA seq 222 aa
MSDTLAAWLGETFDHQPNDLAGFARALTHGSQAADNYERLEFLGDRVLGLAMAEWLYELF
PDEPEGGLSKRLNALVTGAVCADVARGIGVQPHLRLGKQARDDGASDSDNVLGDVMEALI
GALYLDGGYAPAQAFVRSAWRDRVHAAARAPQHPKSALQEWAAAHNRKTPHYEVTDRSGP
QHAPRFTVRVSLGGFAEAEATGTSKQEAETAAAAALLAQVGA
NT seq 669 nt   +upstreamnt  +downstreamnt
atgagcgacaccctcgccgcgtggcttggcgagaccttcgatcaccagcccaacgacctc
gccgggttcgcgcgtgcgctgacgcacggcagccaggcggcggataattacgagcggctc
gaatttctcggcgaccgcgtgctcgggctggcgatggccgaatggctgtacgaactgttc
cccgacgagcccgagggtggcctgtcgaaacggctcaacgcgctggtgacgggtgcggtg
tgcgccgacgtcgcgcgcgggatcggcgtgcagccgcacctccgcctcggcaagcaggcg
cgcgacgacggcgcgagcgacagcgacaacgtgctgggcgacgtgatggaagcgctgatc
ggcgcgctgtacctcgacggcggctacgctccggcgcaagcgttcgttcgctccgcatgg
cgcgaccgcgtccatgcggccgcccgcgcgccgcaacaccccaagtccgcgcttcaggaa
tgggccgccgcgcacaatcgcaagaccccgcactacgaagtcaccgatcgctccggcccg
caacacgcgccgcgcttcacggtgcgtgtcagcctgggcgggttcgccgaggccgaggcg
acgggcacgagcaaacaggaagcggagaccgcggcggcggcagcattgctcgcgcaggtg
ggagcatga

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