Sphingomonas panacisoli: FPZ24_01060
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Entry
FPZ24_01060 CDS
T07288
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spai
Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spai03019
]
FPZ24_01060 (rnc)
03009 Ribosome biogenesis [BR:
spai03009
]
FPZ24_01060 (rnc)
03036 Chromosome and associated proteins [BR:
spai03036
]
FPZ24_01060 (rnc)
Enzymes [BR:
spai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FPZ24_01060 (rnc)
Messenger RNA biogenesis [BR:
spai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FPZ24_01060 (rnc)
Ribosome biogenesis [BR:
spai03009
]
Eukaryotic type
90S particles
RNase
FPZ24_01060 (rnc)
Prokaryotic type
rRNA processing factors
FPZ24_01060 (rnc)
Chromosome and associated proteins [BR:
spai03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FPZ24_01060 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QDZ06235
UniProt:
A0A5B8LEN7
LinkDB
All DBs
Position
complement(214064..214732)
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AA seq
222 aa
AA seq
DB search
MSDTLAAWLGETFDHQPNDLAGFARALTHGSQAADNYERLEFLGDRVLGLAMAEWLYELF
PDEPEGGLSKRLNALVTGAVCADVARGIGVQPHLRLGKQARDDGASDSDNVLGDVMEALI
GALYLDGGYAPAQAFVRSAWRDRVHAAARAPQHPKSALQEWAAAHNRKTPHYEVTDRSGP
QHAPRFTVRVSLGGFAEAEATGTSKQEAETAAAAALLAQVGA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccctcgccgcgtggcttggcgagaccttcgatcaccagcccaacgacctc
gccgggttcgcgcgtgcgctgacgcacggcagccaggcggcggataattacgagcggctc
gaatttctcggcgaccgcgtgctcgggctggcgatggccgaatggctgtacgaactgttc
cccgacgagcccgagggtggcctgtcgaaacggctcaacgcgctggtgacgggtgcggtg
tgcgccgacgtcgcgcgcgggatcggcgtgcagccgcacctccgcctcggcaagcaggcg
cgcgacgacggcgcgagcgacagcgacaacgtgctgggcgacgtgatggaagcgctgatc
ggcgcgctgtacctcgacggcggctacgctccggcgcaagcgttcgttcgctccgcatgg
cgcgaccgcgtccatgcggccgcccgcgcgccgcaacaccccaagtccgcgcttcaggaa
tgggccgccgcgcacaatcgcaagaccccgcactacgaagtcaccgatcgctccggcccg
caacacgcgccgcgcttcacggtgcgtgtcagcctgggcgggttcgccgaggccgaggcg
acgggcacgagcaaacaggaagcggagaccgcggcggcggcagcattgctcgcgcaggtg
ggagcatga
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