KEGG   Sphingomonas panacisoli: FPZ24_01205
Entry
FPZ24_01205       CDS       T07288                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
spai  Sphingomonas panacisoli
Pathway
spai03030  DNA replication
spai03410  Base excision repair
spai03420  Nucleotide excision repair
spai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPZ24_01205 (polA)
   03410 Base excision repair
    FPZ24_01205 (polA)
   03420 Nucleotide excision repair
    FPZ24_01205 (polA)
   03440 Homologous recombination
    FPZ24_01205 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spai03032]
    FPZ24_01205 (polA)
   03400 DNA repair and recombination proteins [BR:spai03400]
    FPZ24_01205 (polA)
Enzymes [BR:spai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FPZ24_01205 (polA)
DNA replication proteins [BR:spai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FPZ24_01205 (polA)
DNA repair and recombination proteins [BR:spai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FPZ24_01205 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FPZ24_01205 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HAMP_N3 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: QDZ06260
UniProt: A0A5B8LGL9
LinkDB
Position
complement(242261..245044)
AA seq 927 aa
MPHLYLVDGSGYIFRAYHQLPPLTNRHGTPAGAVYGYTAMLWKLADALDKAEGPTHLAVV
LDKGSHTFRNDLYDKYKAQRPPPPEDLIPQFPLIREATRAFSLPCIEEEGFEADDIIATY
TCRAVEAGWDVTIVSSDKDLMQLIQPQVDMLDTMKNERRGAEYVQTKFGVRPDQLGDVLA
LMGDAVDNVPGVPGIGAKTAAKLIVEYDNLDAVLAAAPDMKPSKMRDSLIEHEAMARLSR
KLVALHTDTAVPHTLDELKLEGIPPEPLRAFLEDQGFKTLLSRMAAHAPGRETADPVAAA
VAVAESDTPDFIELPPIDCGTYETVTTLDQLDAWIAESHASGTIAIDTETDSLDSMAANL
VGICLATKPGRACYIPIGHRSSDDMFGEVPPQLPLAEVVAALRLLLVDPGVLKIGHNIKY
DLNVLIRHGLDVTPIDDTMVMSFDLDAGQSLAGHGMDEVAHAVLEHTCISFKDVTGTGKK
AISFAQVPLPEATRYGGEDADVTWRLWTRFKPRLAYEGGSRVYEMVDRPLIPVVAGMERA
GIKVDRDHLSRLSGQFAQEMARLEEEIQAEAGQPFQIGSTQQLGAILFDKMGLKGGKKGK
SGAYSTDVTVLEKMKAEGVVIAGLVLDWRQLSKLKSTYTDALQQQIDRQTGRVHTSYSLT
GAQTGRLSSTDPNLQNIPIRTETGRQIRDAFIAEPGHVILAADYSQIELRLAAHMADVPP
LRDAFLRGEDIHAATANELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEIDADEAQA
MISRYFERFPGISAYINDTLEGVRRRGHTETLFGRKTWFPQIKSPIQHVRQGAERAAINA
PIQGTSADIIKRAMARMGPALTEAGLTGTKMLLQVHDELVFEVPESEVEAAKPVIERVMA
TAAEPAITLNVPLAIEIGTGASWGAAH
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgcctcatctctatctcgtcgacggctccggctacatcttccgcgcctatcaccagctg
ccgccgctcaccaaccggcacggcaccccggcgggcgcggtctatggctataccgcgatg
ctgtggaagctggccgacgcgctcgacaaggcggaggggccgacccacctggcggtggtg
ctcgataagggcagccacacgttccgcaacgacctttacgacaagtacaaggcgcagcgt
ccgccgccgcccgaagacctgatcccgcaattcccgctgatccgcgaagcgacccgcgcc
ttctcgctgccgtgcatcgaggaagaagggttcgaggccgacgacatcatcgccacctat
acctgccgcgcggtcgaggcggggtgggacgtcaccatcgtcagctccgacaaggacctg
atgcagctgatccagccgcaggtcgacatgctcgacacgatgaagaacgaacggcgcggc
gccgagtacgtgcagaccaagttcggcgtgcgccccgaccagctcggcgatgtcctcgca
ttgatgggcgatgcggtcgataacgtgccgggcgtgccggggatcggcgcgaaaacggcg
gcgaagctgatcgtcgaatacgacaatctcgacgccgtgctggccgccgcgcccgacatg
aagccgtcgaagatgcgcgacagtctgatcgagcatgaggcgatggcgcggctgtcacgc
aagctggtcgcgctccacaccgacaccgcggtgccgcacacgctcgacgagctgaagcta
gagggcatcccacccgaacccttgcgcgcgttcctggaggatcaggggttcaagaccctc
ctgtcgcgtatggctgcgcacgcgccgggccgtgagaccgccgatccggttgccgcggcg
gtcgcggtcgccgaatccgacacgcccgatttcatcgagctgccgccgatcgactgtggc
acgtacgagaccgtgacgacgctcgaccagctcgatgcgtggatcgccgagagccacgcc
agcggcacgatcgcgatcgataccgagaccgactcgctcgacagcatggcggcgaacctg
gtcggcatctgtctcgcgaccaagcccggccgcgcctgctacatcccgatcggccaccgg
tcgagcgacgacatgttcggcgaagtgccgccgcagctgccgctcgccgaggtggtcgcg
gcgctgcgtctactgctggtcgatcccggcgtgctcaaaatcggccacaacatcaaatac
gacctcaacgtgctgatccgccacgggctcgacgtaaccccgatcgacgacacgatggtg
atgagcttcgacctggacgccggccagagcctcgccgggcatggcatggacgaggtcgcg
cacgccgtgctcgaacacacctgcatcagcttcaaggacgtgaccggcaccggcaagaag
gcgatcagcttcgcgcaagtcccgctccccgaggcgacgcgctacggcggcgaggatgcc
gacgtgacatggcggctatggacccggttcaagccgcggctggcgtatgagggcggaagt
cgcgtctacgagatggtcgatcgcccgttgatcccggtcgtcgccggcatggagcgcgcg
gggatcaaggtcgatcgcgatcatctgtcgcgcctgtcgggccagttcgcgcaagagatg
gcgcggctcgaagaggaaatccaggccgaggcgggccagccgttccagatcggctcgacc
cagcagctcggcgcgatcctgttcgacaagatgggactgaagggcggcaagaagggcaag
tccggcgcctattcgaccgacgtcaccgtcctggaaaaaatgaaggcggagggcgtcgtg
atcgccggcctggtgctcgactggcgccagctgtcgaagctcaaatcgacctataccgac
gcgctccagcagcagatcgaccgccagaccggccgcgtccacaccagctacagcctgacc
ggcgcgcagaccggccgcctctcctcgaccgacccgaacctgcagaacatcccgattcgt
accgagacgggccgccagatccgcgacgccttcatcgccgagccgggccacgtcatcctg
gccgccgactattcgcagatcgagctgcggctggccgcgcacatggccgacgtacccccc
ttgcgcgacgcgttcctgcgcggcgaggacatccacgccgcgaccgccaacgagctgttc
ggcgaggtcaatcgcgacacgcgcgggcgggcgaagacgatcaacttcgcgatcctctac
ggcatttcgcgctggggcctggccggccggctggagatcgacgccgacgaggcgcaggcg
atgatcagtcgatatttcgagcgcttccccggcatctcggcctatatcaacgatacgttg
gagggtgtgcgccgccgcggccacaccgagacgttgttcggccgcaagacctggttccca
cagatcaagtcgccgatccagcacgtccgccagggcgccgaacgcgccgcgatcaacgcg
ccgatccagggtaccagcgccgacatcatcaagcgcgcgatggcgcggatgggaccggcg
ctgaccgaggccgggctgaccggcacgaagatgctgctccaggtccatgacgaactcgtg
ttcgaagtgccggagagcgaagtcgaggcggccaagccggtgatcgaacgcgtcatggcg
acggcggccgaacccgcgatcacgctcaacgtcccgctcgcgatcgagatcggcacgggt
gcgagctggggcgccgcgcattga

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