KEGG   Sphingomonas panacisoli: FPZ24_03900
Entry
FPZ24_03900       CDS       T07288                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
spai  Sphingomonas panacisoli
Pathway
spai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FPZ24_03900 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spai03400]
    FPZ24_03900 (uvrB)
DNA repair and recombination proteins [BR:spai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FPZ24_03900 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FPZ24_03900 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin AAA_22 SWI2_SNF2 Microtub_bd DUF87 AAA_16 SRP54
Other DBs
NCBI-ProteinID: QDZ06726
UniProt: A0A5B8LFK5
LinkDB
Position
760848..763055
AA seq 735 aa
MAIQIRTNLAEPETGQAFIPHRPERPAKVEGGKAFKLVSDYEPSGDQPGAIKELTEAALS
GERDQVLLGVTGSGKTFTMAKVIETLQRPALILAPNKILAAQLYGEFKSFFPDNAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNESIDRMRHSATRSLLERDDVIIVASVSCLYGIGS
VETYSAMIFDLKKGQTVDQREIVRKLVALQYKRNDQAFARGNFRVKGDNLEIFPSHYEDT
AWRISFFGDDIEDIVEFDPLTGKKVASLNYVRVFANSHYVTPGPTLKQAMEAIRHELAER
LKEMEAEGKLLEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRMPGEPPPTLFEYLP
ENALLFVDESHQTIGQINGMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTT
YVSATPGGWEMEQTGGVFAEQVIRPTGLIDPPVEIKPVEDQVQDCINECRKTAEAGYRTL
VTTLTKRMAEDLTEFMHEAGLKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREGL
DIPECGLVTILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAINETNR
RREKQHAYNTEHGITPTTIKRDIGDIIKDVASRDQVTVEIDEDRPHMVGHNLRAYIEELE
KKMRKAASDLEFEEAGRLRDEIRSLEQEELGLPSSEHKAPIMGRSNEGKPGTRKTRYGKQ
SKMRAGMPGSSRRAR
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggcaatccagattcgcaccaacctggccgaacccgagaccgggcaggcgttcattcca
caccggcccgaacgcccggccaaggtggaaggaggcaaggcgttcaagctggtcagcgac
tacgaaccatcgggcgaccagccgggcgcgatcaaggagctgaccgaagcggccttgtcg
ggcgagcgcgaccaggtgctgctgggcgtgacggggtcgggcaagaccttcacgatggcg
aaggtgatcgagacgctgcagcgcccggccttgatcctggcgccgaacaagattctggcg
gcccagctctacggcgagttcaagagcttcttccccgacaatgcggtcgagtatttcgtc
agctactacgactattatcagcccgaggcgtatgtgccgcggtcggacacgtatatcgag
aaggaatcctcggtgaacgagtcgatcgaccggatgcggcattccgccacccggtcgctg
ctcgaacgcgacgacgtgatcatcgtggcgtcggtgtcgtgcctgtacggcatcggatcg
gtcgagacctattccgcgatgatcttcgacctgaagaagggccagaccgtcgatcagcgc
gagatcgtgcgcaagctcgtcgcgctgcagtacaagcgcaacgaccaggcgttcgcgcgc
ggcaatttccgcgtgaagggcgacaacctcgagatattcccgtcgcactatgaggacacc
gcgtggcggatctcgttcttcggcgacgatatcgaggacatcgtcgagttcgatccgctg
acgggcaagaaggtcgcgagcctcaactatgtccgcgtgttcgccaactcgcactacgtc
acgccgggaccgacgctgaaacaggcgatggaggcgatccgccacgaactcgccgagcgg
ctcaaggaaatggaggccgagggcaagttgctcgagcatcaacggctcgaacaacgtacg
aacttcgatctggaaatgattgcggcgactggatcttgtgcggggatcgagaattactcg
cgcttcctgaccggacgtatgccgggcgagccgccgccgaccctgttcgaatatttgccc
gagaatgcgttgctgttcgtcgatgagagccaccagacgatcggccagatcaacggcatg
gcgcggggcgaccatcggcggaagattacgctggccgaatatgggttccgcctgccgtcg
tgcatcgacaaccgccccttacgcttcaacgaatgggacgcgatgcgcccgcagacgacc
tatgtctcggcaacgccgggcgggtgggagatggagcagaccggcggcgtcttcgccgaa
caggtcatccgcccgaccgggctgatcgacccgccggtcgagatcaagccggtcgaggat
caggtgcaggactgcatcaacgaatgccgcaagacggcggaggccggctatcgcacgctc
gtcaccacgctgaccaagcgcatggcggaagatttgaccgaattcatgcacgaggcgggg
ctgaaggtccgctacatgcattccgatgtcgagacgttggagagaatcgagctgatccgt
gatcttaggctcggtgtctacgacgtactggtagggatcaacctgctgcgcgaaggcctc
gatattcccgaatgcggactggtcacgatcctcgacgccgacaaggaaggcttcctgcgc
tccgaaacctcgctgatccagacgatcggccgcgccgcgcgcaacgtcgacgggcgcgtg
atcctctatgccgaccgcatgaccggcagcatggagcgcgcgatcaacgagaccaatcgc
cgccgcgagaagcagcacgcctataacaccgaacacggcatcacgccgaccacgatcaag
cgcgacatcggcgacatcatcaaggacgtcgcgagccgcgaccaggtgacggtcgagatc
gatgaagaccgtccgcacatggtcggccacaatctgcgcgcgtacatcgaggaactcgaa
aagaagatgcgcaaggccgcgtcggacctggagttcgaagaggccgggcgcctgcgcgac
gagatccgcagcctggagcaggaagaactcggcctgccctcgagcgagcacaaagcgccg
atcatgggccggtcgaacgaaggcaagcccggcacgcgcaagactcgctacggcaagcag
tcgaagatgcgggcaggcatgccggggagcagccggcgggcgcggtaa

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