Sphingomonas panacisoli: FPZ24_04650
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Entry
FPZ24_04650 CDS
T07288
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ24_04650 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spai03019
]
FPZ24_04650 (groL)
03110 Chaperones and folding catalysts [BR:
spai03110
]
FPZ24_04650 (groL)
03029 Mitochondrial biogenesis [BR:
spai03029
]
FPZ24_04650 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spai04147
]
FPZ24_04650 (groL)
Enzymes [BR:
spai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FPZ24_04650 (groL)
Messenger RNA biogenesis [BR:
spai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FPZ24_04650 (groL)
Chaperones and folding catalysts [BR:
spai03110
]
Heat shock proteins
HSP60 / Chaperonin
FPZ24_04650 (groL)
Mitochondrial biogenesis [BR:
spai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FPZ24_04650 (groL)
Exosome [BR:
spai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FPZ24_04650 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FPZ24_04650 (groL)
Exosomal proteins of breast cancer cells
FPZ24_04650 (groL)
Exosomal proteins of colorectal cancer cells
FPZ24_04650 (groL)
Exosomal proteins of bladder cancer cells
FPZ24_04650 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Pho88
EAD9
Motif
Other DBs
NCBI-ProteinID:
QDZ06853
UniProt:
A0A5B8LFM2
LinkDB
All DBs
Position
complement(913458..915077)
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSYGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVANKQNDKAGDGTTTATVLAQAIVREGSKAVAAGMNPMDVKRGI
DLAVGTVVKDLEAHAKKVGANSEIAQVATISANGDAEVGQFLAEAMEKVGNEGVITVEEA
KSLETELETVEGMQFDRGYLSPYFVTNAEKLRVELDDPYILIHEKKLGNLQALVPVLEQV
VQGGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV
VSEELGTKLENVTVGMLGRAKKVVIDKDNTTIIDGVGAKTDIDARVTQIRQQIDTTTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALL
RSLRALDGLKAANDDQQSGIDIVRRALRAPARQIAENAGEDGAYVVGKLLENEAYNWGFN
AATGQYEDLVKAGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDKPAAVPAMDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgaagtttgcgtcggacgcgcgtgatcgcatgctgcgtggcgtg
gatacgcttgcaaacgcagtgaaggtcacgctgggtccgaagggtcgtaacgtcgtgatc
gaaaagagctatggcgcgccgcgcatcaccaaggacggcgttaccgtcgcgaaggaaatc
gagctgaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggttgccaacaag
cagaacgacaaggccggcgacggcaccacgacggcgaccgtgctcgcgcaggcgatcgtc
cgcgagggttcgaaggcggtcgccgccggcatgaacccgatggacgtcaagcgcggtatc
gatttggcggtcggcaccgtcgtgaaggacctcgaagcacacgcgaagaaggtcggcgct
aacagcgagatcgcgcaggtcgcgactatctcggccaacggcgatgccgaagtcggccag
ttcctcgccgaggcgatggagaaggttggcaatgaaggcgtgattacggtcgaagaggcg
aagagcctcgagaccgagcttgagacggtcgagggcatgcagttcgaccgtggctatctg
tcgccctatttcgtcaccaatgcagaaaagctgcgcgtcgagctcgacgatccgtacatc
ctgatccacgagaaaaagctcggtaatctccaggcgctggtgccggtgctcgagcaggtc
gtgcagggtggccggccgcttctcatcatcgcggaggatgtcgagggcgaagcgctcgct
acgctcgtcgtcaacaagctgcgcggcggtctgaaggtcgccgcggtgaaggcgccgggc
ttcggcgatcgccgcaaggccatgcttgaagacattgcgatcctgaccggcggcaatgtg
gtcagcgaggagctcggcacgaagctcgagaacgtcacggtcggcatgctcggccgcgcc
aagaaggtggtcatcgacaaagacaacaccacgatcatcgacggcgtcggcgccaagacc
gatatcgacgcgcgtgtgacgcaaatccgccagcagatcgacacgacgaccagcgactac
gaccgcgagaaactgcaggaacgtctcgccaagcttgccggcggcgtcgcggtgatccgc
gtcggcggtgcaaccgaagtcgaggtgaaagagcgcaaggaccgcgtcgacgacgcgctc
cacgcgacccgcgccgcggtcgaggaaggcatcctgccgggcggcggtatcgcgctgctg
cgttcgctgagggcactcgacggcctcaaggctgccaatgacgaccagcagtccggcatc
gacattgtccgtcgcgccctgcgcgcgcctgctcggcagattgccgagaatgctggcgag
gatggggcctatgtcgtgggcaagctgctcgagaacgaggcttacaattggggcttcaat
gccgcgactggccagtatgaagatttggtcaaggctggcgttatcgaccccgccaaggtg
gtgcgcacggcgctgcaggacgcggcgtcggtcgcctcgctgctcatcacaaccgaggcg
ctcgtggcggagctgccaaaggaggacaagccggctgccgtgccggcaatggactactaa
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