Sphingomonas panacisoli: FPZ24_05045
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Entry
FPZ24_05045 CDS
T07288
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai03030
DNA replication
spai03430
Mismatch repair
spai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ24_05045
03430 Mismatch repair
FPZ24_05045
03440 Homologous recombination
FPZ24_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spai03032
]
FPZ24_05045
03400 DNA repair and recombination proteins [BR:
spai03400
]
FPZ24_05045
Enzymes [BR:
spai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ24_05045
DNA replication proteins [BR:
spai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPZ24_05045
DNA repair and recombination proteins [BR:
spai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPZ24_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QDZ06925
UniProt:
A0A5B8LGK7
LinkDB
All DBs
Position
994693..995595
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AA seq
300 aa
AA seq
DB search
MSFRGDDIVPQWLSPDTESAAALLEAHPDYRVLRSLPPLDLLPLPAPEGRLRTAAIIDTE
TTSLDPATGSIIELAICAVTFDGRGRIVGIGPVHDWLEDPGHPLPSEIVKLTGLCDQDLS
GQRIDDARVVEMLSTADLIVAHNARFDATWIEQRYSSLAGQAWCCSLTDVDWRGLGYEGR
QLGALLGEAAGFFNGRHRADSDVAALVALLTTTLSSGRTACSEMILSAQRPTVRIIAEGA
RFEVKDRLKARAYKWDQNIRRWGKEVTSNSVDEERAWLAEQAGCRNPSMRDITWYQRHRV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtttcgaggagacgacatcgtgccgcaatggctgtcgcccgatacagaaagtgct
gccgccctcctggaggcgcatcctgattatcgtgttctaagatcactgccgccgctcgac
ctgctgccgctcccggcgcccgagggccggctacgcaccgccgcgatcatcgacaccgag
accacgtcgctcgatcccgcaaccggcagcatcatcgaactcgccatctgcgcggtcacg
ttcgatggccgcggacggatcgtcgggatcggtccggtccatgattggctggaagacccc
ggccatccgctgccgtccgaaatcgtcaagctgacaggactgtgcgatcaggacttgtcc
ggccagcgcatcgacgatgccagggtggtcgagatgctgtcgaccgccgatctgatcgtc
gcgcacaatgcgagattcgacgcgacctggatcgagcaacgctattccagcctcgccgga
caggcctggtgttgctcgctcaccgacgtggattggcgagggctaggttatgaaggccgc
cagctcggcgccctgctcggcgaggcagccgggttcttcaacggccgccatcgtgcggat
tcggatgtcgcggctttggtcgcgcttctgacgacgacgctgtcgtcggggcgcaccgcg
tgcagcgagatgatcctgtcggcgcaacgcccgaccgtccggatcatcgccgagggcgcg
cggttcgaggtgaaagaccggctcaaggcgcgggcctataagtgggaccagaatatccgc
cgctgggggaaagaggttaccagcaattcggtcgacgaggagcgagcttggctcgccgag
caggccgggtgccgtaacccgagcatgcgcgacatcacatggtatcagcgccaccgcgtc
tga
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