Sphingomonas panacisoli: FPZ24_05105
Help
Entry
FPZ24_05105 CDS
T07288
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00521
Streptomycin biosynthesis
spai00523
Polyketide sugar unit biosynthesis
spai00541
Biosynthesis of various nucleotide sugars
spai01100
Metabolic pathways
spai01110
Biosynthesis of secondary metabolites
spai01250
Biosynthesis of nucleotide sugars
Module
spai_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FPZ24_05105 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FPZ24_05105 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FPZ24_05105 (rfbC)
Enzymes [BR:
spai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FPZ24_05105 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDZ06934
UniProt:
A0A5B8LH47
LinkDB
All DBs
Position
1007003..1007569
Genome browser
AA seq
188 aa
AA seq
DB search
MPNVSLLHPRRFSDSRGWFAEVYSEPAFEKLGIVCHFVQDNHALSISPFTLRGLHFQTPP
HAQAKLVRCVRGRIFDVAVDVRRNSPSFGQWVGAELSADNGDQLFVPAGFAHGYLTLESN
CEVAYKCSAVYAPEHDGGIRWDDPTIGVVWPLPKGIRPQLSAKDEAQPLIADFVSSFDYD
GHPLTSLS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgtcagtctcctgcacccccgccgctttagcgattctcgcggctggttcgcc
gaagtatattccgagccggccttcgaaaaactcggcattgtctgccacttcgtgcaagac
aatcatgctctttcgatatcgcctttcacgctacgtgggctgcatttccagacaccgccc
cacgcccaagccaagctcgttcgttgcgtccgcggacgtatcttcgacgttgcggtcgac
gttcgacgcaactcgccttccttcgggcagtgggttggagcggaattgtcggccgacaac
ggtgaccagctattcgttcccgcgggttttgcgcacggctatttgacgttggaatccaat
tgcgaggtcgcctacaagtgctctgcggtgtatgcgccggagcatgatggcggcattcga
tgggacgatccgaccatcggtgtcgtttggcccttacccaagggtattcgaccgcagctc
tcggccaaggacgaagcgcagccgttgatcgcagatttcgtcagttcgttcgactatgat
ggacatcccctaacgtcactaagctga
DBGET
integrated database retrieval system
