KEGG   Sphingomonas panacisoli: FPZ24_05110
Entry
FPZ24_05110       CDS       T07288                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
spai  Sphingomonas panacisoli
Pathway
spai00521  Streptomycin biosynthesis
spai00523  Polyketide sugar unit biosynthesis
spai00525  Acarbose and validamycin biosynthesis
spai00541  Biosynthesis of various nucleotide sugars
spai01100  Metabolic pathways
spai01110  Biosynthesis of secondary metabolites
spai01250  Biosynthesis of nucleotide sugars
Module
spai_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:spai00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FPZ24_05110 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FPZ24_05110 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FPZ24_05110 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FPZ24_05110 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FPZ24_05110 (rfbB)
Enzymes [BR:spai01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FPZ24_05110 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short KR NAD_binding_10
Other DBs
NCBI-ProteinID: QDZ06935
UniProt: A0A5B8LGL7
LinkDB
Position
1007580..1008635
AA seq 351 aa
MRILVTGGAGFIGSALIRHLVEHTDHSVLNFDKLTYAGSLSTVAGVSSSERYAFVRGDIC
DAAAVRSAIADFRPEVITHLAAESHVDRSIDGPGAFVQTNIVGTYTMLSEARAYWSALDD
PTKEAFRFHHISTDEVFGSLGDDDLFTEDTPYDPRSPYSASKAGSDHLVSAWGHTFGLPV
LITNCSNNYGPYHFPEKLIPLMIVKALGGEALPVYGQGANIRDWLFVEDHVRALRAVFER
GVPGRTYNIGGNSERRNIEVVETLCAILDVERPRADGKSYASQITYVTDRPGHDARYAID
ASRIRDELDWAPAESFDSGIRKTVRWYLDNENWWREIIDQQAAAKRRGLAA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcgtatcctcgtaaccggtggagcggggttcatcggctctgccctaattcgtcatctg
gttgaacacaccgaccatagcgtattgaacttcgacaagctgacttatgccggctcgctt
tccacggtagctggagtatcgtcgagcgagcggtacgcgttcgtccgcggcgacatttgc
gatgcagcggctgtgcgatccgcgatcgccgattttcgtcccgaagtgatcacgcacttg
gcggcagagagtcatgtcgatcgctcgatcgacggccctggcgcattcgtgcagacgaac
atcgtaggtacttatacgatgcttagtgaggcacgtgcttattggtcggcgctggatgat
cccacgaaggaagcattccgctttcatcatatttcgacagacgaagtgtttggatcgctc
ggcgacgatgatttgtttaccgaggacacgccctacgatccgcggtcaccttattcggcc
tccaaagccggatcggaccatttggtttcggcttggggacatacgtttgggctgccggtc
ctgatcaccaattgctcgaacaattacgggccttatcacttcccggaaaaactcatcccg
ttgatgatcgtgaaggctctcggcggtgaagccctgcccgtatacgggcagggtgccaac
atacgtgattggctgtttgtcgaagatcatgttcgggctcttcgagctgtattcgagcgc
ggagttccggggcgaacttataatatcggcggcaactcggagcgtcgcaatatcgaagtc
gtcgagacgctctgcgctattctcgatgtcgaacggcctcgcgcggacggcaaatcttat
gcctcgcaaatcacttatgtgaccgatcggccgggacacgatgctcgctatgctatcgat
gctagccggattcgtgacgagcttgattgggcgcccgccgaatcgttcgacagcggcatc
agaaagacggtgcgctggtacctcgacaacgagaattggtggcgagaaatcattgatcaa
caagccgccgccaaacgacgtggcctagccgcgtga

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