Sphingomonas panacisoli: FPZ24_05110
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Entry
FPZ24_05110 CDS
T07288
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00521
Streptomycin biosynthesis
spai00523
Polyketide sugar unit biosynthesis
spai00525
Acarbose and validamycin biosynthesis
spai00541
Biosynthesis of various nucleotide sugars
spai01100
Metabolic pathways
spai01110
Biosynthesis of secondary metabolites
spai01250
Biosynthesis of nucleotide sugars
Module
spai_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FPZ24_05110 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FPZ24_05110 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FPZ24_05110 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FPZ24_05110 (rfbB)
00525 Acarbose and validamycin biosynthesis
FPZ24_05110 (rfbB)
Enzymes [BR:
spai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FPZ24_05110 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QDZ06935
UniProt:
A0A5B8LGL7
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Position
1007580..1008635
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AA seq
351 aa
AA seq
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MRILVTGGAGFIGSALIRHLVEHTDHSVLNFDKLTYAGSLSTVAGVSSSERYAFVRGDIC
DAAAVRSAIADFRPEVITHLAAESHVDRSIDGPGAFVQTNIVGTYTMLSEARAYWSALDD
PTKEAFRFHHISTDEVFGSLGDDDLFTEDTPYDPRSPYSASKAGSDHLVSAWGHTFGLPV
LITNCSNNYGPYHFPEKLIPLMIVKALGGEALPVYGQGANIRDWLFVEDHVRALRAVFER
GVPGRTYNIGGNSERRNIEVVETLCAILDVERPRADGKSYASQITYVTDRPGHDARYAID
ASRIRDELDWAPAESFDSGIRKTVRWYLDNENWWREIIDQQAAAKRRGLAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcctcgtaaccggtggagcggggttcatcggctctgccctaattcgtcatctg
gttgaacacaccgaccatagcgtattgaacttcgacaagctgacttatgccggctcgctt
tccacggtagctggagtatcgtcgagcgagcggtacgcgttcgtccgcggcgacatttgc
gatgcagcggctgtgcgatccgcgatcgccgattttcgtcccgaagtgatcacgcacttg
gcggcagagagtcatgtcgatcgctcgatcgacggccctggcgcattcgtgcagacgaac
atcgtaggtacttatacgatgcttagtgaggcacgtgcttattggtcggcgctggatgat
cccacgaaggaagcattccgctttcatcatatttcgacagacgaagtgtttggatcgctc
ggcgacgatgatttgtttaccgaggacacgccctacgatccgcggtcaccttattcggcc
tccaaagccggatcggaccatttggtttcggcttggggacatacgtttgggctgccggtc
ctgatcaccaattgctcgaacaattacgggccttatcacttcccggaaaaactcatcccg
ttgatgatcgtgaaggctctcggcggtgaagccctgcccgtatacgggcagggtgccaac
atacgtgattggctgtttgtcgaagatcatgttcgggctcttcgagctgtattcgagcgc
ggagttccggggcgaacttataatatcggcggcaactcggagcgtcgcaatatcgaagtc
gtcgagacgctctgcgctattctcgatgtcgaacggcctcgcgcggacggcaaatcttat
gcctcgcaaatcacttatgtgaccgatcggccgggacacgatgctcgctatgctatcgat
gctagccggattcgtgacgagcttgattgggcgcccgccgaatcgttcgacagcggcatc
agaaagacggtgcgctggtacctcgacaacgagaattggtggcgagaaatcattgatcaa
caagccgccgccaaacgacgtggcctagccgcgtga
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