Sphingomonas panacisoli: FPZ24_05405
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Entry
FPZ24_05405 CDS
T07288
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FPZ24_05405 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spai01007
]
FPZ24_05405 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spai03016
]
FPZ24_05405 (trpS)
Enzymes [BR:
spai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
FPZ24_05405 (trpS)
Amino acid related enzymes [BR:
spai01007
]
Aminoacyl-tRNA synthetase
Class I (G)
FPZ24_05405 (trpS)
Transfer RNA biogenesis [BR:
spai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FPZ24_05405 (trpS)
Prokaryotic type
FPZ24_05405 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QDZ06985
UniProt:
A0A5B8LGR2
LinkDB
All DBs
Position
complement(1074267..1075271)
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AA seq
334 aa
AA seq
DB search
MRVVSGIQPTGNLHLGNYLGAIKQWVAMQDAMGADDVCLFFLADLHAISLPVVPSELANA
TVEMTATLLACGIDPERSILFNQTRVPAHSELAWLLNGTARMGWLNRMTQWKDKAGKNRE
GSSVALFDYPVLQAADVLLYQATHVPVGEDQKQHLELARDIATKFNLDYGTELFTLPEPF
VSKAAPRIMSLRDGGAKMSKSDPSDLSRINLIDSDDTIVSKIKKAKSDADVLPSDVAGLD
GRPEAKNLVTIYAALADIAPADVVAQFGGQGFGQFKPALADLAVAKLGPIRNRLTRLLDD
RAAVAGALERGAEKARSLAAPTLRAAQQAIGLQV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtttccggcatccagcccaccggcaatctgcacctcggcaattacctcggc
gcgatcaagcaatgggtcgccatgcaggacgcgatgggcgcggacgacgtgtgcctgttc
ttcctcgccgacctccacgccatttcgctcccggtcgtgccgagcgagctggccaatgcg
acggtcgagatgaccgcgaccttgctcgcctgcggtatcgatcccgagcgctcgatcctg
ttcaaccagacgcgcgtgccggcgcattcggaactggcgtggttgctcaacggtacggcg
cggatgggctggctcaaccgtatgacgcagtggaaggacaaggccggcaagaaccgcgaa
gggtcgagtgtcgcgttgttcgattacccggtgctgcaggcggcggacgtgctgctctat
caggcgacgcatgtgccggtgggcgaagaccagaaacagcatctcgaactggcgcgcgac
atcgccaccaagttcaacctcgactacggcaccgagctgttcaccctgcccgagccgttc
gtgtcgaaggccgcgccgcggatcatgagtctgcgtgacggcggggcgaagatgtccaag
tcagacccgtccgacctgtcgcggattaacctcatcgattcggacgacaccatcgtgtcg
aagatcaagaaggccaagtccgacgccgatgtcctgccgagcgacgtggcgggcctggac
ggccggccggaggcgaagaacctggtgacgatctacgccgccctggcggacatcgccccc
gccgacgtggtcgcgcagttcggcggccaggggttcggccagttcaagccggcactggcc
gatctcgcggtcgccaagctcggcccgatccgcaaccggctcacccgcctgctcgacgat
cgtgcagcggtcgcgggcgcgctggagcggggcgcggaaaaggctcgcagcctagccgca
ccgaccttgcgcgcggcgcaacaggcgatcggactacaagtctga
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