Sphingomonas panacisoli: FPZ24_07950
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Entry
FPZ24_07950 CDS
T07288
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spai
Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spai03400
]
FPZ24_07950 (addA)
Enzymes [BR:
spai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPZ24_07950 (addA)
DNA repair and recombination proteins [BR:
spai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FPZ24_07950 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Paramyxo_C
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QDZ07420
UniProt:
A0A5B8LJZ6
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All DBs
Position
1557788..1561207
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AA seq
1139 aa
AA seq
DB search
MSKLAGNLPPLVAEQARASDPRTHVWLAASAGTGKTQVLAARVYRLLLGGTDPGAILCLT
FTKTGAAEMAGRINARLAAWVRMKETDLFSDLQALGEKGSPSQIALARTLFAKVLDAPGG
GICIQTIHGFCQSLLAAFPVEAGLVPGFRPLEAREEAQLAHEALAGMLVDAEREGRVGPT
AAIGALSKALGEGGAEGFLQACAKAPDALNALPSGEGVQPFIRRALDLPTGDIEDEIAQG
CAAIDEEGLRVVHDFNLAWGTKGGLERAGLVRDWLELSPVERVAGLETLHRVWAKADGDI
RSFVKGQAPQDPDYPPTATAFYDECAALLALRTRAAYADLLAQGLVVGRDYAEAYRAAKR
RAGAVDFDDLIRATVELLGQPGMGDWVRYKLDQATDHVLIDEAQDTNLKQWQIVNAVVED
FFAGAGAKDRKVRTLFTVGDHKQAIFGFQGTDPIFFSAAEQSFRQRAEVASDLPEVDPIP
FEQLSLTASFRSTAPILEFVDAAIGVLPEPGLGAVNLEKHASKVAGAGQVNLWSPTLADQ
GDDEGEEGWVADAVRTHAMRIARQVRAWIDDGVMLESKGRPLRPEDVMILVKRRGELASL
IVARLYAEGVPVAGVDRLRLTAPLAVQDLLAAIRFVLQPRDDLALASLLVSPLIGWSQDE
LMYAAMKRRGGLWQHLQATQPPERLDPLNAMLRRADFTTPYVFLEELLTGTLDGRRKLLR
RLGQEARDPIDELLNAALEFERVAIPSLQRFLDWFDRGDVEIVRDPSAPLDAVRVMTAHG
AKGLQAPLVILADATADPESRPRSTMEWEVAESVKLPIFRPKKDQRSGLLAEAIDEADRR
ELAEHWRLFYVAATRAEERLEIAGALGPRANGVPSDNSWYAVADAALTTLGAGETATARR
SFAGVEPQLPAALSSRAETAVARVDLPTWARQPAPQEARPPRPLAPSSIGEDDVPDPPPT
PAMRTAAERGRLIHALFERLPAVAPDVRTVAADRWLATVGGITDSEVRADMTATVCNIIA
DPAHAALFGPDSLGEAPISAVLRSGHVIAGTVDRLLVEPDRVRVVDFKTGRRVPLSLEEV
PEFHLRQMSAYAEALRVIFPGRAIEAALLYTASPRLFDLPPDLLGAHKPRLATTEQSLA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagctcgcgggcaacctcccgccgttggtcgcggaacaggcgcgggcgagcgat
ccgcgcacccatgtctggttggcggcgtcggcggggacgggcaagactcaggtgctggcg
gcgcgcgtctatcgactgctgctgggcggcaccgatcccggcgcgatcctgtgcctaacc
ttcaccaaaactggggccgcggagatggccgggcggatcaacgcgcggctggcggcgtgg
gtgcggatgaaagagaccgacctcttcagcgacctgcaggcgctgggcgagaagggcagt
ccgtcgcagatcgcgctcgcgcgtactctattcgccaaggtgctcgacgcgccgggcggc
gggatctgcatccagacgatccatggcttctgccagtcgctgctcgcggcgtttccggtc
gaggccgggcttgtcccggggttccgtccgctggaggcgcgcgaggaagcgcaattggcg
cacgaagcgctcgccggaatgctggtcgacgcggagcgcgagggccgtgtcgggccgacc
gcggcgatcggtgcgctgagcaaggcgctgggtgagggtggggcggaaggtttccttcag
gcctgcgccaaggcgcctgatgcgctgaatgcactgccgtcgggcgagggcgtacaaccg
ttcatccgccgcgcgctcgacttaccgaccggtgatatcgaggacgagatcgcgcaaggc
tgcgcggcgatcgacgaggaagggttgcgtgtcgttcatgacttcaatctagcttggggc
acaaagggcggactggagcgcgccggcctggtccgcgactggctcgaactgtcgccggtc
gagcgcgtggccgggctggaaacgctgcaccgcgtctgggccaaggccgacggcgatatc
cggtcgttcgtcaaagggcaggcaccgcaggatcccgactacccgccgaccgcgacggcg
ttctacgacgaatgcgccgcgttgctcgcgctacggacgcgtgctgcttatgccgacttg
ctcgcgcagggactggtcgtcggacgcgactatgccgaggcgtatcgcgctgcgaagcgc
cgcgccggcgcggtcgatttcgacgatttgatccgtgcgaccgtggaactgctgggacag
cccggcatgggcgattgggtgcgctacaagctcgaccaggcgaccgaccatgtcctgatc
gacgaagcacaagacaccaatctcaagcagtggcagatcgtcaacgcggtggtggaagat
ttcttcgcgggcgcgggcgcgaaggaccgcaaggtgcggaccttgttcaccgtcggcgac
cacaagcaggcgattttcgggttccagggcaccgacccgatcttctttagcgccgccgag
caatcgttccgccagcgtgcggaggtcgcgagcgacctgcccgaagtcgatccgattccg
ttcgagcaactgtcgctgaccgcctcgtttcgctcgaccgcgccgatcctggagttcgtc
gatgcggcgatcggggtgctgcccgagcctggcctcggcgccgtcaacctggagaagcac
gccagcaaggtcgccggcgccggccaagtcaatctttggtcgcccacactcgccgatcag
ggcgacgacgaaggcgaggagggctgggtcgccgatgccgtccgcacgcacgccatgcgg
atcgcgcgacaggtgagggcgtggatcgacgacggcgtcatgctggagagcaaggggcgg
ccgctgcggcccgaggacgtgatgatattggtcaagcggcgcggcgagctcgcgtccctg
atcgtcgcgcggctttacgccgagggcgtgccggtggcgggggtcgatcggctgcggctt
acggcgccgctcgcggtacaggacctgctcgccgcgattcgcttcgtgctgcaaccgcgc
gacgatctcgcgctcgccagtttgctggtttcgccgttgatcgggtggagccaggacgag
ctgatgtacgccgcgatgaagcgacgcggtgggttgtggcagcaccttcaggcgacgcaa
ccgcccgaacggctcgatccgctcaacgcgatgctgcggcgagcggacttcacgacgccc
tatgtgttcctcgaggaactgctgaccggcaccctcgatggacggcgaaagttgcttcgg
cgactcgggcaagaagcgcgcgatccgatcgacgaattgctcaacgctgcactcgagttc
gaacgcgtcgcgatcccgtcgctgcaacgcttcctcgactggttcgatcgcggcgatgtc
gagatcgtgcgcgatccctcggcgccgctcgatgccgtgcgcgtcatgaccgcgcatggc
gccaagggattgcaggcgccgctcgtgatcctggccgatgccaccgccgatcccgaatcg
cggccgcgatcgacgatggaatgggaagtggcggagagcgtaaaattgccgatcttccgg
cccaagaaggatcagcgatcgggcctgctggcggaggcgatcgacgaggctgaccggcgc
gaactcgccgagcattggcggctgttctacgtcgccgcgacgcgggcggaggaacggttg
gagattgccggggcgctcggcccacgcgccaatggcgtgccgtcggacaatagctggtat
gccgttgccgacgccgcgttgacgacgctcggggctggcgaaacggcgacggcgcggcga
tcgttcgcgggtgtcgagccacagcttccggccgcgctctcatccagggcggagaccgcc
gtcgcacgcgtcgatctcccgacatgggcgcgccaaccagcgccgcaggaggcgcgtccg
ccccggccgctcgccccgtcgtcgatcggcgaggacgacgtacccgatccgccgccgacg
ccggcgatgcgcaccgccgccgagcgcgggcggttgatccacgcgctgttcgagcgcttg
ccggcggtcgcgccggatgtacgcacggtcgccgccgacagatggctggccacggtgggc
ggcatcaccgattccgaagtccgagcggacatgaccgcgaccgtttgcaacatcattgcc
gatcccgcccatgcggcgctgttcggccccgactcgctgggcgaagcgccgatctccgcg
gtgctgcgtagcggtcacgtcatcgccggcaccgtcgatcgcttgctagtcgagccggat
cgcgtccgcgtggtcgatttcaagaccggccgccgcgtgccgttgtcgctcgaagaggtg
ccggaattccacctgcgccagatgtccgcttatgccgaggcgctgcgggtgatctttccc
ggtcgcgcgatcgaggcggcgttgctctacacggccagcccgcgcctgttcgacctgccg
ccggacttgctcggcgcgcacaagccgcgcttggccacgacggagcaaagcttggcgtaa
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