Sphingomonas panacisoli: FPZ24_08650
Help
Entry
FPZ24_08650 CDS
T07288
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FPZ24_08650 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spai01007
]
FPZ24_08650 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spai03016
]
FPZ24_08650 (aspS)
03029 Mitochondrial biogenesis [BR:
spai03029
]
FPZ24_08650 (aspS)
Enzymes [BR:
spai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FPZ24_08650 (aspS)
Amino acid related enzymes [BR:
spai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FPZ24_08650 (aspS)
Transfer RNA biogenesis [BR:
spai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FPZ24_08650 (aspS)
Prokaryotic type
Other AARSs
FPZ24_08650 (aspS)
Mitochondrial biogenesis [BR:
spai03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FPZ24_08650 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QDZ07547
UniProt:
A0A5B8LH08
LinkDB
All DBs
Position
complement(1690554..1692389)
Genome browser
AA seq
611 aa
AA seq
DB search
MHAYRSHTCAALTAAEVGQDVRLSGWVHRKRDHGGVLFVDLRDHYGITQVVADSDSPALA
ILEGLRAESVITIDGTVKARAEGTANANLATGEIEVFAKSVTIQSAAQELPLPVAGEADY
PEDIRLRYRFLDLRREKLHANIVLRSNVISSLRRRMVDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSYVTQDDVFAAIEPVLHGVFEEFANWQDKGRTVSPLPFKRIPYRESMLKYGSDKPDLRN
PILITDVSEQFKGSGFGRFASMVEAGDVVRALPAPNTAEKSRKFFDDMNSWAQGEGFPGL
GYATQKDGVFGGPIANNHGQEGMKAIADALGLGPNDGIFFAAGKEGQAAKLAGLARTRVA
EQLELIDANRFEFCWIVDFPMFEYDEDAKKVDFSHNPFSMPQGELEALNTKDPLDILAYQ
YDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYTQADVDTNFAGMINAFKFGAPPHGGSAP
GVDRIVMLLADEPNIREVIVFPMTQKAEDLMMGAPNFATNKQLRELNIRLVEQAGAAKAA
PIAEAVDPAAG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgttcgcacacttgcgccgccctgaccgctgcagaggtcggacaggac
gtccgactgtcgggctgggtgcaccgcaagcgcgaccatggcggcgtgctgttcgtcgat
ctgcgcgaccattacggcatcacccaggtggtggcggacagcgacagcccggcgctggcg
atcctcgaagggttgcgcgcggaatcggttattacgatcgacggcacggtgaaggcgcgc
gccgagggcacggcaaacgccaacctcgcgaccggcgaaatcgaagtgttcgcaaagagc
gtcacgatccagtcggcggcgcaggaattgccgctgccggtggcgggcgaggcagattat
cccgaggatatccgcctgcgctaccgcttcctcgatctccgtcgcgagaagctccacgcc
aatatcgtgctgcgctcgaacgtcatttcgagcctgcgccgccgcatggtcgatcagggg
ttcaccgaattccagacgccgatcctgaccgcatcgagccccgagggcgcacgcgactat
ctggtccccagccgcgtccatccgggcaagttctacgcgcttccccaggcgccgcagatg
ttcaagcagctgctgatggtcgccgggttcgaccgctatttccagatcgcgccgtgcttc
cgcgatgaggatgcgcgcgccgaccgttcgcccggcgagttctatcagcttgatttcgag
atgagctacgtcacgcaggacgacgtgttcgcggcgatcgagccggtgctgcacggcgtg
ttcgaggaattcgcgaattggcaggataagggccgcaccgtcagcccgctgccgttcaag
cgcatcccgtaccgggaatcgatgctcaagtacggatccgacaagcccgatctgcgcaac
ccgatcctgatcaccgacgtctccgagcagttcaagggctcgggcttcggccgcttcgcg
tcgatggtggaagcgggcgacgtcgtccgcgcgctgccggcgccgaacaccgccgagaaa
tcgcgcaaattcttcgacgatatgaacagctgggcgcagggcgagggcttccccggcctc
ggctatgcgacgcagaaggacggcgtgttcggcgggccgatcgcgaacaatcacgggcag
gagggcatgaaggcgatcgccgacgcgctcggcctcggcccgaacgacggcatcttcttc
gcggccggcaaggaaggccaagcggccaagctcgccggtctcgcccgcacgcgtgtcgcc
gaacagctcgaactgatcgacgcgaaccgcttcgaattctgctggatcgtcgatttcccg
atgttcgaatatgacgaggacgcgaagaaggtcgatttcagccacaacccgttctcgatg
ccgcagggcgagctggaagcgctgaacacgaaagacccgctcgatatcctggcgtatcag
tacgacatcgtctgcaacggcgtggagctgtcgtcgggcgcgatccggaaccaccggccc
gagatcatgtacaaggcgttcgagatcgcgggttatacccaagccgatgtcgacaccaac
ttcgccggcatgatcaacgcgttcaagttcggcgcgcccccgcatggtggctctgccccc
ggcgtcgaccgcatcgtcatgctgctggccgacgagcccaacatccgcgaggtaatcgtc
ttcccgatgacgcagaaggccgaagacctgatgatgggcgcgccgaacttcgcgaccaac
aagcagttgcgcgagctcaacatccgcctggtcgaacaggccggtgcggcgaaggccgcg
ccgatcgccgaagccgtcgatcccgccgcgggctaa
DBGET
integrated database retrieval system
