Sphingomonas panacisoli: FPZ24_09530
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Entry
FPZ24_09530 CDS
T07288
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai03030
DNA replication
spai03430
Mismatch repair
spai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ24_09530
03430 Mismatch repair
FPZ24_09530
03440 Homologous recombination
FPZ24_09530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spai03032
]
FPZ24_09530
03400 DNA repair and recombination proteins [BR:
spai03400
]
FPZ24_09530
Enzymes [BR:
spai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ24_09530
DNA replication proteins [BR:
spai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPZ24_09530
DNA repair and recombination proteins [BR:
spai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPZ24_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
AAA
AAA_5
AAA_22
RuvB_N
AAA_16
AAA_30
DUF815
AAA_14
AAA_24
AAA_assoc_2
AAA_19
AAA_18
T2SSE
PIF1
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
QDZ07701
UniProt:
A0A5B8LI18
LinkDB
All DBs
Position
complement(1867266..1868891)
Genome browser
AA seq
541 aa
AA seq
DB search
MSDSFDLGEPPQPKDTAYRVLARKYRPQNFDQLIGQDAMVQTLANAIRRGRLAHAFLLTG
VRGVGKTSTARLVAKALNCIGPDGQGGPTIDPCGVCDPCVSIAEGRNIDVIEMDAASHTG
VDDMRAVIDAARLAAFGARFKIYIIDEVHMLSKNAFNALLKTLEEPPEHVKFLLATTEVQ
KVPVTVLSRCQRFDLRRIPADKLAAHFAYVSELEGAEAEPEALALIARAADGSARDGLSI
LDQAIAHAGMEGGGVTAPAVRTMLGLSDRAAIRDLFGLLLDSDAPGALAALRTQYDLGVD
PQSVLRGLLETVHAVTLAKLGGDADPAQSAEEREAYQGWARSLSFPALHRLWQLLLKGHD
EVGRAALPIEAGEMALLRVVHASSLPDPGELARQIASGAPIAAAPAAGGAPASAAAPVDA
LPATFEDMVGLIQRNGGGSLLSHLNANARPVRYAPPELTLSTQRPLPADLPAQLAARLQD
LTGVKWKITTEDAAGEATLSERRKAAEEAERAEILETPIVKAAFEAFPDAVLENWNKEAS
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccttcgacctcggcgagccgccgcagcccaaagacactgcctatcgcgtc
ctcgcgcgcaaatatcggccgcagaatttcgatcaactgatcggccaagacgcgatggtg
caaacgctggccaacgcgatccggcgcgggcgattggcgcacgctttcctgctgaccggc
gtgcgtggggtcggcaagacaagcaccgctcgcttggtcgccaaagcgctcaactgtatt
ggtcccgacgggcagggcggccctacgatcgatccctgcggcgtgtgcgatccctgcgta
tcgatcgctgagggtcgtaacatcgacgtgatagagatggacgcggcgtcgcataccggc
gtcgacgacatgcgcgccgtgatcgacgcggcgcggctcgcggcattcggtgcccggttc
aagatctacatcatcgacgaagttcacatgctgtcgaagaacgcgttcaatgcacttctg
aagacattggaagaaccgcctgaacatgtgaagtttctgctcgcgacgacggaggtacag
aaggtgccggtgacggtactgtcccggtgccagcggttcgacctgcggcggatcccggcg
gacaagctggcggcgcatttcgcgtatgtttcggagcttgagggcgccgaagccgaaccc
gaggcgctggccctgattgcgcgcgcggcggacggatcggcgcgtgatgggctgtcgatc
ctcgaccaagcgatcgcgcatgccgggatggaaggtggcggcgtgaccgcgccggcggtg
cgcacgatgctcggcctgagcgaccgcgccgcgatccgcgatcttttcgggttgctgctc
gacagcgacgcccccggcgcgctggcagcgttgcggacgcaatacgatctcggcgtcgat
ccccaatcggtgctgcgcgggctgctggaaacggtccatgcggtgacgctggcgaagctc
ggcggcgatgccgacccggcgcagtcggccgaagagcgcgaggcgtatcagggctgggcg
cgcagcttgtcttttccggcgctacaccggctgtggcagttgctgttgaaggggcatgac
gaggtcgggcgggcggcgctgcccatcgaagccggtgagatggcattgctcagggtcgtc
catgcttccagcctgcccgatcctggtgaacttgcgcggcagatcgcgtcgggcgccccg
atcgcggcagcgccggccgcgggcggcgcaccggcatctgctgccgcgccggttgatgcg
ttgcccgcgacgttcgaggacatggtcggactgatccagcgcaacggcggcgggtcttta
ttgtcgcacctcaacgccaatgcgcgcccggtgcgctatgcgccgcccgaattgaccctg
agcacgcagcggccgttgcccgccgatctgccggcgcaattggcggcgcggctgcaggat
ctgaccggcgtcaaatggaagatcacgaccgaggatgccgcaggggaggcgaccttgtcc
gaacggcgcaaggccgcggaagaagctgagcgggctgaaatcctcgaaacccccatcgtc
aaagccgcgttcgaggccttccccgacgcggtgttggaaaactggaacaaggaagcgagt
gcgtga
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integrated database retrieval system
