Sphingomonas panacisoli: FPZ24_12325
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Entry
FPZ24_12325 CDS
T07288
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spai
Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spai03016
]
FPZ24_12325 (miaB)
Enzymes [BR:
spai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FPZ24_12325 (miaB)
Transfer RNA biogenesis [BR:
spai03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FPZ24_12325 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QDZ08167
UniProt:
A0A5B8LIR5
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All DBs
Position
2450947..2452260
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AA seq
437 aa
AA seq
DB search
MTAKTAPKTYHVKSFGCQMNVYDGERMGELMAAQGLTATDDANAADLVVLNTCHIREKAT
EKVYSDIGRLRKHGANPMIAVAGCVAQAEGEEIAHRAKVDIVVGPQAYHNLPDLVAKATR
GELGLDTDMPVLSKFGALPARRKVGPSAFLTVQEGCDKFCTYCVVPYTRGAEISRPWQAL
VDEAKSLVDAGAKEITLLGQNVNAWSDGDRDLGALIRELDRIPGLARIRYTTSHPNDMTQ
GLIDAHRDVEKLMPFLHLPVQSGSDRVLKAMNRSHSRDSYLRILDRVRAVRPDIALSGDF
IVGFPGETEEEFADTLSLIDAVGYSLAFSFKYSPRPGTPAATMDGQIAPAVMDDRLQRLQ
AALNRDQAAFNATTVGRTCDVLIERPGKLPGQMLGKSPWLQSVHLMTAAQIGDIVEVEIV
RADPNSLSGIETIRAAA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaagaccgcccccaagacctaccacgtcaaatcgttcggctgccagatgaac
gtctatgacggcgagcggatgggcgagctgatggccgcgcagggcctgaccgcgaccgac
gacgccaatgccgccgatctcgtcgtgctcaacacctgccacatccgcgagaaagcgacc
gagaaggtctattcggacatcggccgcctgcgcaaacacggcgcgaacccgatgatcgcg
gtcgccggctgcgtcgcgcaggccgagggcgaggagatcgcccaccgtgccaaggtcgat
atcgtggttggtccgcaggcctatcacaacctgcccgacctggtggcgaaggccacgcgc
ggcgagctcgggctcgacaccgacatgccggtcctgtcgaagttcggcgccctgcccgcc
cgccgcaaggtcgggccgagcgcgttcctgacggtgcaggaagggtgcgacaaattctgc
acctattgcgtcgtcccctacacgcgcggcgcggaaatcagtcggccgtggcaggcgctg
gtcgacgaagcgaagtcgctggtcgatgcgggcgccaaggaaatcaccctgctcggccag
aacgtcaacgcttggtctgacggcgaccgcgacctcggcgcgctgatccgcgagctcgac
cgcatcccggggctcgcgcgtatccgctacacgacaagccaccccaacgacatgacgcag
gggctgatcgacgcgcaccgggatgtcgaaaagctgatgccgttcctccatctgccggtg
cagtcgggcagcgaccgcgtgctgaaggcgatgaaccgcagtcacagccgcgattcgtat
ctacgcatcctcgaccgcgtccgcgccgtgcgccccgacatcgcgctgtcgggcgacttc
atcgtcggcttccccggcgagaccgaggaggaattcgccgacacgctgagcctgatcgac
gccgtcggctacagcctggcgttcagcttcaaatattcaccccgccccggcacgcccgcc
gcgaccatggacggccagatcgcgccggcggtgatggacgatcgcctgcaacggcttcag
gcagcgctcaatcgcgaccaggccgcgttcaacgcgacgaccgtgggacgcacctgcgac
gtactgatcgagcgccccggcaagctgccgggccagatgctcggcaagtcgccttggctg
caatctgtgcacttgatgaccgccgcacagatcggcgacatcgtcgaggtggaaatcgtc
cgcgccgacccgaattctttgtccggaattgagacgattcgcgccgcggcctga
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