Sphingomonas panacisoli: FPZ24_15465
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Entry
FPZ24_15465 CDS
T07288
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00300
Lysine biosynthesis
spai00470
D-Amino acid metabolism
spai01100
Metabolic pathways
spai01110
Biosynthesis of secondary metabolites
spai01120
Microbial metabolism in diverse environments
spai01230
Biosynthesis of amino acids
Module
spai_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FPZ24_15465 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FPZ24_15465 (dapF)
Enzymes [BR:
spai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FPZ24_15465 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QDZ08693
UniProt:
A0A5B8LKM7
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All DBs
Position
complement(3106353..3107294)
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AA seq
313 aa
AA seq
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MRIDFIKCHGSGNDFALVDARGVARDDGDWAVVARALADRRGAVGSDGLLLLTDGDGQHA
FGMRMFNSDGSEAETCLNGLRCVARAGLSALGIDQALVRLKTSGAEVRRDPDLAPGVVTI
GELAGPASLELDDWPMTIGRHQNVQMPIAGLPSDRAFTAVAIPNPHLIAFVDAIDEAELV
AAGEACEAAPHWLPNRANVSFVEVRGPDALFVRTHERGVGLTDSCGSAMAASLFAACLTE
RADFDAEVTLFNRGGLVKGCAAPDGMVRLSGNATWEWEGSVEVDLDRALAGDFRVARHFN
DEIAAWGAVIEGV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgacttcatcaaatgccacggatcgggtaacgatttcgcgctggtcgatgcg
cgcggagtcgcgcgcgacgatggcgactgggcggtcgtcgcgcgggcgctggccgatcgg
cgcggggcggtggggagcgacgggctgctgctgctgaccgacggcgacgggcaacacgcg
ttcggcatgcggatgttcaacagcgacgggtcggaggcggagacgtgcctcaacggcttg
cgctgcgtcgcgcgcgcggggctgagtgcgttggggatcgaccaggcgctggtgcggctg
aagacgagcggggcggaggtgcggcgcgatcccgacctggcgcccggggtggtgacgatc
ggcgaactggcggggccggcgagcctcgagctcgacgactggccgatgacgatcgggcgg
caccagaacgtgcagatgccgatcgcgggcctgccgagcgatcgtgcgttcaccgcggtc
gcgatccccaacccgcatctgatcgcgttcgtcgatgcgatcgacgaggcggagttagtc
gcggcgggcgaggcgtgcgaggcggcgccccactggctgccgaaccgcgccaacgtctcg
ttcgtcgaagtacgcgggccggatgcgctgttcgtccgcacgcacgagcgcggggtcggg
ctgaccgacagttgcgggagtgcgatggcggcgtcgctgttcgcggcgtgcctgaccgag
cgcgcggatttcgatgccgaggtgacgttgttcaaccgcggcgggctggtgaagggctgt
gccgcgcccgacgggatggtgcggctgtcaggcaatgcgacctgggaatgggaagggtcg
gtcgaggtcgatctcgaccgtgcgctggcgggggattttcgggtcgcgcggcatttcaac
gacgagattgctgcttggggcgcggtgatcgaaggcgtatag
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