KEGG   Sphingomonas panacisoli: FPZ24_15670
Entry
FPZ24_15670       CDS       T07288                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
spai  Sphingomonas panacisoli
Pathway
spai03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:spai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FPZ24_15670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spai03400]
    FPZ24_15670
DNA repair and recombination proteins [BR:spai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FPZ24_15670
SSDB
Motif
Pfam: Ku zf-CCCH_6
Other DBs
NCBI-ProteinID: QDZ08727
UniProt: A0A5B8LKE8
LinkDB
Position
complement(3146386..3147255)
AA seq 289 aa
MAARAYWQGQIRLALVSIPVEIYTATKSGAQIAFHQVHEPSGKRIKYEKVVPGIGEVDPD
DIVKGYELHKGDYVLLDQDEIDAVKLESKKTLELTQFVDADEIDVLYFERPYFVVPADDL
AEEAFIVLREALRQSKKVGLGQLAMRGREYIVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDSKPDEDLLDLATTLIEKKSHKFDPSKFHDRYVDALKDLIARKSKQKTNRKIIEDKD
EGGGRSASNVVDLMAALKKSIEKPAAKATARKPAAKHAPAKKAPAKKRA
NT seq 870 nt   +upstreamnt  +downstreamnt
atggcagcgcgcgcttattggcagggacagatcaggctcgcgctcgtctcgatccccgtc
gaaatctacaccgcgaccaaatcgggcgcgcagatcgcgttccaccaggtccacgagccc
tcgggcaaacgcatcaagtacgaaaaggtcgtgcccggcatcggcgaggtcgatcccgac
gacatcgtcaagggatacgagctgcacaaaggcgactatgtcctgctcgatcaggacgag
atcgacgccgtgaagctcgaatcgaagaagacgctcgagctcacccagttcgtcgacgcc
gacgagatcgacgtactctatttcgaacgcccgtatttcgtcgtccctgccgacgatctg
gccgaggaagcgttcatcgtgctgcgcgaggcgctgcgccagtcgaagaaggtcgggctg
ggtcagctcgcgatgcgcggtcgggaatatatcgtcagcctgaagccgtgcgggcgcggg
atggtgctggagacgctgcggtacgccgatgaggtcaacaaggcccagggctatttccgc
gacatccccgattccaaacccgacgaggatctgctcgatttggcgacgacgctgatcgag
aagaaatcgcacaagttcgatccgtccaaattccacgatcgctatgtcgatgcgctgaag
gatctgatcgcgcgcaagtcgaaacagaagaccaaccgcaagatcatcgaggacaaggac
gaaggcggcgggcgctcggcctcgaacgtcgtcgatctgatggcggcgctcaagaaatcg
atcgagaaaccggcggccaaggctaccgccaggaagccggcggccaaacatgcgccggct
aagaaggcaccggcaaagaagcgtgcctag

DBGET integrated database retrieval system