KEGG   Sphingomonas panacisoli: FPZ24_16005
Entry
FPZ24_16005       CDS       T07288                                 
Name
(GenBank) 2'-5' RNA ligase family protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
spai  Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:spai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spai03016]
    FPZ24_16005
Enzymes [BR:spai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     FPZ24_16005
Transfer RNA biogenesis [BR:spai03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    FPZ24_16005
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase DUF3742
Other DBs
NCBI-ProteinID: QDZ08785
UniProt: A0A5B8LM98
LinkDB
Position
3218869..3219366
AA seq 165 aa
MLYIMIKPPPAELRQVCARRSTYGLDDSYPADRLHCTMLRLGDEADWPSSRLEQLRTLLG
TISAEPFPVAFDLIAGNLLRGARGMPLAAAFHRVLRQKAEMCGVTIEHNFWLHLTLAYRG
VAIAAARKIEPISWMVEEFLLIRSDRGHEPLGRWPLQQRQLALAL
NT seq 498 nt   +upstreamnt  +downstreamnt
atgttgtatatcatgatcaagccgccccccgccgaactgcgccaagtctgcgcccggcgg
tccacctatggcctcgacgacagttatccggccgatcgcctgcactgtacgatgctgcga
ctgggcgacgaggccgactggccgagttcgcggctcgagcaactgagaaccttgctcggc
accatatcggccgagccgtttccggtggcgttcgacctgatcgccggcaatctgttgcgc
ggtgcgcgcggcatgcctttggccgcagcctttcatcgcgtgttgcggcagaaggcggag
atgtgcggcgtgacgatcgaacacaatttctggctgcacttgaccctggcctatcgcggc
gtggcgatcgcggcggcacgcaagatcgagccgatcagctggatggtcgaggaattcctc
ctgatccgcagcgatcggggccatgaaccgttgggtcgctggccgttgcaacaacgtcag
ctcgcgctcgcgctataa

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