Sphingomonas panacisoli: FPZ24_16560
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Entry
FPZ24_16560 CDS
T07288
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00260
Glycine, serine and threonine metabolism
spai00460
Cyanoamino acid metabolism
spai00630
Glyoxylate and dicarboxylate metabolism
spai00670
One carbon pool by folate
spai00680
Methane metabolism
spai01100
Metabolic pathways
spai01110
Biosynthesis of secondary metabolites
spai01120
Microbial metabolism in diverse environments
spai01200
Carbon metabolism
spai01230
Biosynthesis of amino acids
spai01240
Biosynthesis of cofactors
spai04981
Folate transport and metabolism
Module
spai_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FPZ24_16560
09102 Energy metabolism
00680 Methane metabolism
FPZ24_16560
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FPZ24_16560
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FPZ24_16560
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FPZ24_16560
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FPZ24_16560
Enzymes [BR:
spai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FPZ24_16560
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QDZ08887
UniProt:
A0A5B8LL09
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All DBs
Position
complement(3323209..3324522)
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AA seq
437 aa
AA seq
DB search
MSSNPTTLSDVQPDGFFTRGLADADPAVFAGVRHELAREQNQIELIASENIVSKAVLEAQ
GSVFTNKYAEGYPGKRYYQGCHPSDEVEQLAIDRAKQLFDCGYANVQPHSGAQANGAVML
ALTKPGDTIMGLSLDAGGHLTHGAKAAMSGKWFNAVQYGVTPDTHLIDFDEVERLAKEHR
PKLIITGGSAYPRQIDFAKFRAIADEVGALFMVDMAHFAGLVAGGVHPTPFGHAHVVTTT
THKTLRGPRGGMVMTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALEPGFKSYA
AAIIENAKVLAATLKERGCEVVSGGTDTHLALIDLTPLGVTGKDADEALERAGITCNKNG
IPNDPLPPVKTSGIRVGSPAGTTRGFGPAEFREIGNMVADVLDGLAKNGEQGDAQVENAV
QQRVNALCHRFPIYQGL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacccgaccaccctgtccgacgtccagcccgacggtttctttacgcgtggc
ctggccgacgccgaccccgccgtcttcgcgggcgtacgccacgaactggcgcgcgagcag
aaccagatcgagctgatcgcgtcggagaatatcgtctccaaggcggtgctcgaggcgcag
gggtcggtgttcaccaacaagtacgccgaaggctatccggggaagcgctactatcagggc
tgccacccgtcggacgaggtcgagcagctcgcgatcgaccgcgccaagcagctgttcgac
tgcggctatgccaacgtccagccgcactctggcgcgcaggcgaacggcgcggtgatgctc
gcgctgaccaagccgggcgacacgatcatggggctgagcctcgacgcgggcggtcacctg
actcacggcgccaaggccgcgatgtcgggcaaatggttcaacgcggtgcagtacggcgtg
acccccgacacccacctgatcgacttcgacgaagtcgagcggttggccaaggagcatcgc
ccgaagctgatcatcaccggcggcagcgcctatccgcgccagatcgacttcgcgaagttc
cgcgcgatcgcggacgaggtgggcgcgctgttcatggtcgacatggcgcacttcgccggt
ctcgtcgcgggcggcgttcacccaacccccttcggccacgcccatgtcgtgaccaccacg
acgcacaagacactgcgcggtccgcgcggcggcatggtgatgaccgacgacgaggcgatc
gcgaagaagatcaactccgccgtgtttccgggcctgcagggcggcccgctgatgcacgtc
atcgccgccaaggcggtcgcgttcggcgaggcgctggagccgggcttcaaatcctacgcg
gcggcgatcatcgagaatgccaaggtgctggccgcgacgctaaaggagcgcggctgcgaa
gtcgtatcgggcggcaccgacacgcacctcgccctgatcgatctcacgccgctcggcgtg
accggcaaagacgccgacgaagcgctcgaacgcgccgggatcacctgcaataagaacggc
atccccaacgacccgctgcccccggtcaagaccagcggcatccgcgtcggatcgcccgcc
ggcaccacccgcggattcggtcccgccgagttccgcgagatcggcaatatggtcgccgac
gtgctcgacggactcgccaaaaatggtgaacagggcgacgcgcaggtagaaaatgctgtg
cagcagcgtgttaatgcactatgtcaccgctttcccatctaccaaggactgtga
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