Sulfurimonas paralvinellae: FM071_04220
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Entry
FM071_04220 CDS
T06862
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spal
Sulfurimonas paralvinellae
Pathway
spal03030
DNA replication
spal03430
Mismatch repair
spal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM071_04220 (dnaE)
03430 Mismatch repair
FM071_04220 (dnaE)
03440 Homologous recombination
FM071_04220 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spal03032
]
FM071_04220 (dnaE)
03400 DNA repair and recombination proteins [BR:
spal03400
]
FM071_04220 (dnaE)
Enzymes [BR:
spal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM071_04220 (dnaE)
DNA replication proteins [BR:
spal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM071_04220 (dnaE)
DNA repair and recombination proteins [BR:
spal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM071_04220 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Mt_ATP_synt
DUF655
Motif
Other DBs
NCBI-ProteinID:
QOP45530
UniProt:
A0A7M1B778
LinkDB
All DBs
Position
798476..802093
Genome browser
AA seq
1205 aa
AA seq
DB search
MSAQLPFTHLHLHTEYSLLDGANKLSNLVSRIKELGMTSVAMTDHGNMFGAIDFYKQMKG
AGLKPIIGMEGYIHNGETLNDKSTKQRFHICLYAKNKKGYENLMYLSSKAFIEGFYYFPR
INKKELREHSEGLICSSACLQGEVNWHLNLQNERNVKNGALGYEGALEVAREYQDIFGDD
FYLELMRHGIGDQLYIDEQILKISKETGIKIVATNDTHYTYPDDAQYHEAFMCIGMNKLY
DDPNRMRHSVHEFYIKSPEEMARLFADIPEALLHTQEIVDKCEDFVPIVKSPTPPNFKFT
KEYAQAEGLDIDFEDDAPLPEDATEEEKKKWLSAADKNDAAYFVHKCREGLEKRLQIVPP
ERHQEYRERLEFEMDIINSMKFPGYMMIVWDFVKEAKRIDVAVGPGRGSAAGSLVAYSLE
ITDIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVKKYGRNQVAQIITFGS
LLAKGVIRDVARVLDMPLSQADKMAKLIPDELGITLNGKTKNGKFVEGAFQKEPKIQELI
ESDPQAARVWEFAKKLEGLKRNSGMHAAGVVISNEELWKKTPIYKPSGEDTFVTQYSLNY
MEDVDLIKFDFLGLKTLDVIQNAVKLIKRRYDKDVNWHEIDENDQKVYDVIQTGDTVGMF
QIESSGMQDLNRRLKPSSFEDLIAVLALYRPGPMESGMLDDFIERKHGRQEITYVFPALE
EILKPTYGVIVYQEQVMQIVQTIGGFSLGGADIVRRAMGKKKVEEMLKYNKEFSEGAAKQ
GLDYKTASELFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPNEFMAALLTSDKDNT
EKVVRYIDEVKHMGIELAPPDICDSQLEFSAITKDGQDVILFGLGAIKGVGEAAIHAMLE
EREENGDYVSLQDFVNRIEPSKVNKRVIESIIKAGGFDRYGYSRKALLDQIDLIVETAKK
ASEAKKNAVGSLFGDDDAITTVELTLTNSDEYELKEILEFEKDTLGFYVSGHPMDDYRET
LDELNYTLSSELENLKDGSYSIFIGKVEEITKKISKKGNQFGIVNLMDFHGNMEIMLFSD
KLEQLEAMNLEEPVAFKARVTHTDFGPRLNVTKIMTLKDAKRETKKVKKEIQEAPPEPIN
LAVRLSQDFDVLENLYSIIRQNPGNRPLKVTIVSKLHNVVIDSAIRVGSQIVGALEGNEH
VDIIG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcacaacttccatttacacatcttcatcttcatacagaatactcgctgcttgac
ggagccaataaactctccaatctcgtctcacgtattaaagaactcggtatgacctccgtc
gccatgacggatcatggaaatatgttcggtgcaatagatttttacaaacagatgaaaggt
gcagggcttaaacctatcatcgggatggaaggctatatccataacggcgagacgctgaat
gacaaaagcacgaaacagcgttttcacatctgtctttatgcgaagaataaaaaagggtat
gaaaaccttatgtacctctcttccaaagcttttatagaggggttttactattttccacgc
attaataaaaaagagctgcgtgagcatagtgaagggcttatctgctcttctgcatgtctg
cagggggaagtgaactggcatctaaatcttcaaaatgagagaaatgtaaaaaacggtgcg
cttggttatgagggtgcactcgaagttgccagagaatatcaggatatcttcggggatgat
ttctatcttgaactgatgcgtcacggtatcggtgaccagctctatatagatgagcagata
ttgaaaatatcaaaagagacaggcatcaaaatagtcgctacaaatgatactcactacacc
tatcctgatgatgcacagtatcatgaagcttttatgtgtattgggatgaataaactttat
gacgatccaaaccgtatgcgtcactccgtacatgagttctatatcaaatcacccgaagag
atggcacgtctttttgcagacattcctgaagcgctgctgcatacacaagagatcgttgac
aagtgtgaagattttgtccctattgtaaaatcaccgacaccaccgaactttaaatttacc
aaagagtatgcccaagctgaagggctggatatcgattttgaagatgatgcaccactgccg
gaagatgcaacggaagaagagaagaaaaaatggctctcagcagctgataaaaatgatgcg
gcttactttgtacacaaatgtagagaagggcttgaaaaacgattgcagatcgttcctcct
gagcgtcatcaggagtacagggagcgtttagagtttgagatggacatcattaattcaatg
aagttcccgggatatatgatgatcgtttgggactttgttaaagaggcaaaacgcatagat
gtagctgtaggacccggacgtggttcggctgcgggaagtcttgtagcttattctttggag
atcaccgacatagacccgatgaagtacgatctgctctttgagcgttttttaaatcctgaa
cgtgtatctatgcccgatatcgatatggactttatgcaggcgcgacgcggcgaggtcatt
gactatgttgtgaagaagtatggacgtaatcaggtagcacagatcattacttttggttct
ttgcttgccaaaggggtcattcgtgatgttgcccgtgttttggatatgccgctttctcaa
gccgataaaatggcaaaacttattcctgatgagttgggtatcacgctcaacggaaagaca
aaaaacggtaagttcgtagaaggggcttttcaaaaagagccaaaaattcaggagcttatc
gagtcagatccgcaggctgcgcgtgtttgggaatttgcaaagaaactcgaaggactgaag
cgtaactcgggtatgcatgccgcgggtgtcgttataagcaatgaagagctttggaagaag
acgcctatctacaagccaagcggtgaggatacttttgttacacagtattcactcaactat
atggaagatgtcgatcttatcaaatttgactttttgggtctcaaaacgcttgatgttatc
caaaatgctgtcaagctcatcaaacgccgttatgacaaagatgtgaattggcacgagata
gacgaaaatgaccaaaaagtctatgatgtgatccaaacaggtgatacggtaggaatgttc
cagatagagtcatcgggtatgcaggacttgaaccgtcggctcaagccttcgagttttgaa
gaccttattgcggtcttggcactctaccgtcccggaccgatggagtctgggatgctcgat
gacttcattgaacgtaaacatggacgtcaggagattacatacgtctttcctgcgcttgaa
gagatactcaaacctacctacggagttattgtttatcaagaacaggttatgcagatagtg
cagaccattggtggtttcagtcttggcggtgcggacatcgttcgtcgtgccatgggtaag
aaaaaagttgaagagatgctcaagtacaacaaagagttctctgaaggtgcagctaaacag
gggcttgattataaaacggcatcggaactctttgaccttattgaaaaatttgccggttac
ggttttaataagtctcactctgcggcgtatgctatggtcacgtttcagacggcatggctg
aaaacatactacccaaatgaatttatggcagcactgctcacatcagataaagacaataca
gaaaaggtcgtgcgttacatagatgaagtcaaacatatgggcatcgagctggctccgcct
gatatctgtgactctcagcttgaattctccgctattacaaaagatgggcaggatgttatt
ctgtttggacttggtgcaatcaaaggtgttggagaagctgccattcatgccatgcttgaa
gagcgtgaggagaatggtgactatgtctctttacaagattttgtcaacagaatagagccg
agtaaggtaaataaacgcgttatagaatccatcatcaaagcaggtgggtttgacagatat
ggatactcacgcaaggcgctgctcgatcagatagacctcatagttgaaacggcaaaaaaa
gcgagtgaagcgaagaaaaatgcggtaggttctctctttggagatgatgatgcgataacg
accgttgaattgacactgacaaactctgatgagtatgaactcaaagagatactggagttt
gaaaaagatactcttggcttttatgtatcgggtcacccgatggatgattaccgcgagacc
ttggatgaactcaattacacgctttcatcggagttggaaaatctcaaagatggttcttat
tctattttcattggaaaagtggaagaaattacgaagaagatatcgaaaaaagggaatcaa
ttcggcattgtaaacctcatggactttcatggcaatatggagatcatgctcttttcagat
aagctcgaacaacttgaagcgatgaaccttgaagagccggtcgcttttaaagcaagagtg
acacacacagacttcggaccacggcttaatgtgacaaagataatgacacttaaagatgcc
aaacgtgagacgaaaaaggtcaaaaaagagatacaagaagctccgcctgagccgataaac
ttagctgtaagacttagtcaggatttcgatgtacttgaaaacttatactccatcatacgt
caaaatcctggaaatagacctttgaaagtgacaatcgtctcaaaactgcataatgtagtc
atagactcggcaatacgtgttggcagtcaaatagtcggagccttggaaggcaatgaacat
gtggatattataggatag
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