Sulfurimonas paralvinellae: FM071_06885
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Entry
FM071_06885 CDS
T06862
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spal
Sulfurimonas paralvinellae
Pathway
spal03420
Nucleotide excision repair
spal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FM071_06885
03430 Mismatch repair
FM071_06885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spal03400
]
FM071_06885
Enzymes [BR:
spal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FM071_06885
DNA repair and recombination proteins [BR:
spal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FM071_06885
MMR (mismatch excision repair)
Other MMR factors
FM071_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QOP46036
UniProt:
A0A7M1B9C7
LinkDB
All DBs
Position
complement(1326357..1328438)
Genome browser
AA seq
693 aa
AA seq
DB search
MPLSRLNEEQHAAATSKANQNLIIASAGTGKTSTIVGRIAHLLNSGVQPQEILLLTFTNK
AAAEMVARIGEYFGGDVAKKIDAGTFHAVSYRWLKKRDKRVVLKQQRELKTLFRSVFEKR
SFMHIDADVQAYGGNYLYDLYSYYQNTELEKNFEQWLIENYPEHELFAMIYADVVDEFEA
LKREYGFLNFNDLLLEFRKMAKESDLGYKEVLVDEYQDTNALQGTLIDAMNPPSLFCVGD
YDQSIYAFNGADITIIGSFTKKYPAAVVHTLTKNYRSSRPILSLANKVIEINERIYPKKL
EVTRDYDAHLPKLLAFDELFDQYHGVADKISQSATPREEIAVIFRNNSSADGIEVGLREL
GIACKRKGGTSFFDSREVKAVLDLYTLLVNEADMMAFIHLFEFARGIGSAMAKELYIALK
SLGQGSMFYGLYAPDESVKNPFEKRKLNHQLGLFDDFLELGAVGKYAKLGFEAKFMKNPV
LKHPKLTKESATFLHNFYLLFRDLKGIKQPRTIVRKIVDSQLFKYIGDYLSTKRATLKDG
SIDEKQKEESNIRINRKMLLLQELAKPYNEHDRFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYVVDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILYLSYAKYDKIKKQ
NFLPSQFLYEAGLVAKDENYRALVMKEADKEED
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaagccgtttaaatgaagaacagcatgccgctgcaacttcaaaagccaatcaa
aatcttattatcgcttctgcagggaccggaaagacatcgacgatagtcggcagaatcgca
cacctgctgaactccggtgtacagcctcaagagatactgctgctgacttttacaaataaa
gcagcagctgagatggtggcacgcattggggagtattttggcggggatgttgcaaaaaag
atagatgcgggaacttttcatgcagtgagctatcgctggctgaaaaaacgggacaaacgg
gttgtgcttaaacagcaacgtgagttgaaaactctttttcgctctgtatttgaaaaacgt
tcttttatgcatatagatgctgatgtacaggcttatggcggtaactatctctatgatctc
tactcctactatcaaaataccgagttggaaaagaattttgaacagtggcttatagaaaac
tatcccgaacatgaactttttgccatgatatacgctgatgtcgtcgatgagttcgaagcg
ctcaagcgtgagtatggttttttgaatttcaatgacctgcttttagagtttcgaaagatg
gcaaaagagagtgatcttggttataaagaggtacttgtagatgagtaccaagataccaat
gcattgcagggcacgttgatagatgcgatgaatccgccttcactcttttgcgtgggggat
tatgatcagtctatttatgcttttaacggtgcagatattaccatcataggctcttttacg
aagaagtatcctgctgcagttgtccataccttgacaaaaaattaccgttcttctcgacct
attttgtcgttggcaaacaaagtaatagagataaatgagagaatctatcctaaaaaactc
gaggttacacgtgattatgatgcacatcttccgaagcttttggcatttgatgaacttttt
gatcagtatcatggagtggctgacaagatctcgcaaagtgctacgccgcgtgaggagatc
gctgtcatcttccgtaacaactcttcagcagatggtattgaagtagggctgcgtgagctt
ggtatagcctgcaagcgaaaaggtggaacgagcttctttgattcgcgtgaggtgaaggca
gtacttgacctttacacgctgcttgtcaatgaagcggatatgatggcctttattcacctc
tttgagtttgcccgcggcattggaagtgctatggcaaaagagctctatattgccttgaaa
tctcttgggcaggggagtatgttctatggactctatgcacctgatgaaagtgtgaagaat
ccttttgaaaaacgaaagctcaaccatcaactggggcttttcgatgactttttggaactc
ggtgccgtgggtaaatatgccaaactcggatttgaagcgaagtttatgaaaaaccctgtg
cttaaacatccgaaactgacaaaagaatccgcaacatttttgcataatttctatctgctc
tttcgtgatttaaaaggcattaagcagccgagaactattgttcgtaaaatcgttgattct
cagctttttaaatatattggtgattatctttcgacaaaacgtgcgacactcaaagacggg
agcattgatgagaagcaaaaagaggagtccaatatccgcatcaacagaaagatgctgctg
ttgcaggagttggcaaaaccatataacgagcatgacaggttcttaaatgcgatgatactc
ggctcttctgacctcacgcagggcgagggtgtgaaccttttaagtgttcacgcaagtaaa
gggcttgaatataaagaggtctatgttgttgacttgatggacggaagatttccaaaccgc
aagctgatgcagcgcggaggcagtcttgatgaagagagacgcctcttttatgttgcggtg
acacgtgcaaaagatattctctacctaagctatgccaagtatgacaagataaaaaaacag
aacttcctgccaagccagtttctctatgaagctggacttgttgcaaaagatgagaattac
cgcgcccttgttatgaaagaggcggacaaagaagaagactaa
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