Sulfurimonas paralvinellae: FM071_08470
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Entry
FM071_08470 CDS
T06862
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spal
Sulfurimonas paralvinellae
Pathway
spal03420
Nucleotide excision repair
spal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FM071_08470
03430 Mismatch repair
FM071_08470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spal03400
]
FM071_08470
Enzymes [BR:
spal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FM071_08470
DNA repair and recombination proteins [BR:
spal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FM071_08470
MMR (mismatch excision repair)
Other MMR factors
FM071_08470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
ADDB_N
eIF3_p135
AAA_11
PhoH
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QOP46320
UniProt:
A0A7M1B9D2
LinkDB
All DBs
Position
complement(1654221..1656272)
Genome browser
AA seq
683 aa
AA seq
DB search
MEKIFKNLNDSQSAAVKQTEGPVLILAGAGSGKTTTIISRLAYLIEVVGIPPANTLTLTF
TNKAAREMKERSMAMMEKNGAYPPLLCTFHKFGLLFLKFNIHRLGRQNNFVVIDTDDKKR
IIKKINSELPTPLIASEISRYKNSLMSPDDAYKQAELFNYKQIAEVYREYENHLKENNLV
DFDDLIALTYKLLDENPELAQETSQKYQYIMIDEYQDTNELQLKLIQKLCTSHNNICVVG
DDDQSIYGWRGAHIRNIMEFDEDFEGASVFKLEENYRSRAPILKTANALIEHNRSRLGKS
LIATRGEGEDVAILNSNDENEEARKIALKIQKLLDSGVEASEIAILYRVNVLSRSIEEGL
NRAGIGYKLVGGVRFLERAEVKDLISYIRVITNNHDDFSLKRIVNKPKRGLGKASVDKIE
LAAHAKGSSIFEYIKTVDFAELEALVKKKNATTLKKFIADIDDVARVAKESTYEFIDVLE
DTFHLKDIYVNMQDGQERILNMDEFYGLFRDFIKNHPEASLDEFLNELTLQSEQDQVEGE
SIYMMSIHASKGLEFEHVFVIGMEEGFLPLVGDGSDLEEERRLGYVSFTRAKESLTLSHA
GSRFYKGRRSDLAKSRFFNEAGLCDGSLIVEKKTAYKKGDLVRHKIFGTGRVTGVSKSGR
EFKLQINFAGTKRDILASFVERL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatatttaaaaatttaaatgattctcaatcagctgcagtaaaacaaacagaa
ggccctgtacttatcttggcaggtgcaggaagcgggaagacaacgactattatttcccgt
ttagcatacctcattgaggttgtcggtataccgcctgcaaatactttgacgcttactttt
acaaataaagcagcgcgtgagatgaaagagcgttctatggcgatgatggagaaaaacggt
gcctatccgccgcttctttgtacatttcataaatttggtttgctctttttaaaatttaac
attcaccgtttaggacgccaaaacaattttgtcgttattgatacggatgataaaaaaaga
atcataaagaagataaactcagaactgcctacaccgctcatagcaagtgagatttcccgt
tacaaaaactctttgatgtctcctgatgatgcctataagcaggcggaactctttaactat
aaacagatcgcagaggtttaccgtgagtatgaaaatcatcttaaggagaataatcttgtc
gattttgatgacctgatcgcattgacatataagctgcttgatgaaaatccggagctggct
caggaaacatcgcagaagtatcagtatattatgatcgatgaatatcaagataccaatgaa
ctgcagttaaagctcattcaaaaactctgcacttcccataacaatatctgtgtggttggt
gatgacgatcagagtatttacggctggcgtggcgcacatattcgaaatattatggagttc
gatgaagattttgagggagcgagtgtttttaaactcgaagagaactaccgctcacgtgca
cctatcttaaagactgccaatgcactcattgaacacaaccgttcccgtcttggcaagagt
cttatcgcaactcgcggggagggtgaagatgttgccatccttaattccaacgatgagaat
gaagaggcaagaaaaatcgcactgaagattcaaaaacttttggattcgggcgttgaagca
agtgagatagcgattttgtatcgtgtcaatgtgctttctcgttctatagaagaggggctt
aaccgtgcaggcatcggttataaacttgtcggtggtgttcgcttccttgagagggcggaa
gtcaaagaccttatctcttacatacgagttattacaaacaatcacgatgatttttcactc
aagcgtatcgtaaacaagccaaaacgcggacttggaaaagcgagtgttgacaagatagaa
ctggctgctcacgcaaagggaagctctatctttgagtatataaaaacagttgattttgca
gagcttgaagcacttgtgaaaaagaaaaacgcaacgacgctgaaaaaattcattgcagat
atcgacgatgtagctcgggtggcgaaagagtcgacttatgaatttatcgacgtactcgaa
gatacattccatctcaaagatatttatgtcaatatgcaagacgggcaggaacgcatcctc
aatatggatgaattctacggacttttccgtgacttcattaaaaatcatcccgaagcttca
ttggatgagtttttaaatgaactgacactgcagagtgagcaggatcaggtcgagggagaa
tctatctatatgatgagcatacacgcttccaaaggtctggagtttgagcatgtgtttgtc
attggaatggaagagggctttctgccattggtaggtgacggcagtgaccttgaagaggag
cgtcgtcttggttatgtctcatttacccgtgcaaaagagtcgttgacactctctcacgca
ggcagccgtttttacaaagggcgcagaagtgatttggcaaaaagccgttttttcaatgaa
gcgggactctgtgacggttcactgatagtcgagaaaaagactgcctataaaaaaggtgac
ctcgttcgccataagatttttggaacaggtcgtgtaacaggtgtgagtaaatcgggacga
gagtttaaactgcagatcaattttgcaggaacaaaaagagatattcttgcatcttttgta
gaaagattatga
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