Sulfurimonas paralvinellae: FM071_08520
Help
Entry
FM071_08520 CDS
T06862
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spal
Sulfurimonas paralvinellae
Pathway
spal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FM071_08520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spal03019
]
FM071_08520
03016 Transfer RNA biogenesis [BR:
spal03016
]
FM071_08520
Enzymes [BR:
spal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FM071_08520
Messenger RNA biogenesis [BR:
spal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FM071_08520
Transfer RNA biogenesis [BR:
spal03016
]
Prokaryotic type
tRNA degradation factors
FM071_08520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
TACO1_YebC_N
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QOP46329
UniProt:
A0A7M1B9C6
LinkDB
All DBs
Position
complement(1661761..1663953)
Genome browser
AA seq
730 aa
AA seq
DB search
MKYDVKLDLENRVEEYSFGDVAKQANGSAWVKSGKTVILATVVIDETEIVKDDFLPLTVQ
YIEKTYAAGKIPGGFFKRETKPSDFETLTSRIVDRSLRPLFPKGFGHPTQITIMVFSADA
DSDMQVLALNAASAALYVSDIDINRSVSAVRAAKVDGELVLNPTLTQLKNSTLDLYLSGT
KEELLMIEMRSIGSEKIDVEEIPEPVLDPIMDPSIGTVVIDTHVSNAMGEDELIEVLDKT
QKVLFEANVEYEVAFGPYQKDIKPMELKAHQLNADMLTYVKENHLADIKDALSQMAKSER
STALRELRKKIIAAKEEWADVELELELKDAIEAAKKEYVRSQILNDKVRADGRALNEVRP
ISIDTNILPAAHASCLFTRGQTQALVVLTMGGPKDAQMFEGLTDEGTQNENFMVHYNFPG
FSVGEASPIMGTKRRELGHGNLAKRALEPIINLEGQTVRLVSEILESNGSSSMATVCGGY
LALRAADIETSDTVAGIAMGMVSEGDNYAILSDIMGLEDHDGDMDFKVTGSKDGITAMQM
DIKLGGISLNILKEALYQAKEGRSHIIDIMLEAESKIEFNDGVLPSTEHFHIDPGFIGEI
IGQAGKTIREIIEKFEVAIDIDKKDGKVKITGKNKEGVKGAKEHIHSIVNAPKKEKIKYE
VGSVYEGVVKRIVDFGAFVELSDGTDGLLHISKISKERVNDVKDVLHEGQKVKVEILEFK
GNKISLGMAE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgatgtaaaactagatttagaaaacagagtagaagagtacagttttggtgat
gtggcaaaacaggcaaacgggagtgcatgggtaaagtccggcaaaacagtcattctcgca
acggtagtgattgatgagacagaaattgtcaaagatgattttttgccgcttactgtgcag
tatatagaaaaaacatatgcagccggaaagattcctggcggctttttcaaacgtgaaaca
aaaccgagtgattttgagacattgacctcacgcatcgtagatagaagtctgcgtccgctc
tttccaaaaggtttcggccatcctacacagattactattatggtcttttcagcggatgca
gattcagatatgcaggtactcgcactcaatgccgcatctgcagctctctatgtctctgac
attgacatcaacagaagtgtttctgctgtgcgtgccgcaaaagtggatggtgaactagta
ctcaatccaaccctcacgcaactgaaaaactctacgcttgacctttatctttcaggtaca
aaagaggaacttttgatgatagagatgcgttcgataggaagtgagaaaatagatgtagaa
gagattcctgaaccagtgcttgatcctattatggacccgtcaatcggcacagtggtcatc
gatacgcatgtttccaatgctatgggagaagatgaacttatagaagtgcttgacaaaaca
cagaaagttctttttgaagccaatgtagagtatgaagtggcatttggaccgtatcaaaaa
gatatcaagcctatggagttaaaagcgcatcagcttaatgctgatatgcttacttatgtc
aaagaaaatcatcttgcagatatcaaagatgcgctttctcaaatggcaaaatcagaacgc
tctactgccctgcgtgagcttcgaaaaaagattattgccgctaaagaagagtgggctgat
gtcgaacttgagcttgaattaaaagatgcgatcgaagcggctaaaaaagagtatgtccgt
tcacagattttaaatgataaagtgcgtgcagacggtcgtgctttaaatgaagtacgacct
atcagcatcgatacgaatattttaccggcagcacatgcatcatgtctctttacacgtgga
cagacgcaggcacttgtagtcctaacaatgggtggaccaaaagatgcacagatgtttgag
ggtctaacagatgaaggtacgcaaaatgaaaatttcatggtgcattataactttcctgga
ttttcagtcggtgaagcaagtccgatcatgggaacgaaacgacgtgagcttggccacgga
aacttggcaaaacgggcgttagaaccgatcataaaccttgaagggcagactgttcgtctt
gtatcggagattttagaatcaaatggttcatcctcaatggcaactgtatgtggcggttat
ttagcgcttcgtgcagcagatattgagacgagtgataccgttgccggaattgcgatgggt
atggtgagtgaaggcgataactatgcaatcctctcagatatcatgggacttgaagaccat
gacggtgatatggactttaaagtaacaggttcaaaagacggtattacggcaatgcagatg
gatatcaagctcggcggtatctctttaaatatattaaaagaggcactctatcaggcaaaa
gagggcagaagccatattattgatattatgcttgaagctgagagtaagatagaatttaat
gacggtgttcttccttcaacggaacatttccatatagatccaggatttatcggtgagatt
atcggtcaggctggtaaaactatccgtgagatcattgagaaattcgaagttgccattgac
atcgataaaaaagacggtaaagtgaaaattaccggtaaaaacaaagagggtgtcaaaggt
gccaaagagcatattcacagtatagtaaatgcacctaaaaaagagaagataaaatatgaa
gtaggcagcgtatatgaaggcgttgtcaaacgcattgtggattttggtgcttttgttgaa
ctttcggacggtactgacggtcttttacacatctcaaaaatttcaaaagagcgtgtcaat
gatgtaaaagatgtgcttcatgaagggcaaaaagttaaagttgaaatcttagagttcaaa
ggcaataaaatctctttgggcatggcagagtaa
DBGET
integrated database retrieval system
