Streptococcus parapneumoniae: SP4011_03030
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Entry
SP4011_03030 CDS
T10256
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spam Streptococcus parapneumoniae
Pathway
spam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SP4011_03030 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spam03021
]
SP4011_03030 (rpoC)
03400 DNA repair and recombination proteins [BR:
spam03400
]
SP4011_03030 (rpoC)
Enzymes [BR:
spam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SP4011_03030 (rpoC)
Transcription machinery [BR:
spam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SP4011_03030 (rpoC)
DNA repair and recombination proteins [BR:
spam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SP4011_03030 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Dehydratase_LU
Motif
Other DBs
NCBI-ProteinID:
BDT63886
UniProt:
A0ABM8CEL2
LinkDB
All DBs
Position
311758..315435
Genome browser
AA seq
1225 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYRGIVCDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLL
KQVDLEKEIAELKEELKTATGQKRVKAIRRLDVLDAFYKSGNKPEWMILNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMAYRNGYVHLHSRVGI
ATDSLNKPWTEEQKHKVLLTTVGKILFNDIMPEGLPYLQEPNNANLTEGVPAKYFLPLGG
DIKEAISNLELNPPFKKKNLGNIIAEIFKRFRTTETSALLDRMKNLGYHHSTLAGLTVGI
ADIPVVDDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLIANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRSIAEGKEMIESLE
ERLNGRYTKKTVKHPETGAVIIGPNELITEDKAREIVNAGVEEVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRVEVGDQV
ARGAALTEGSIQPKRLLAVRDVLSVETYLLGEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDINDFTDANKDVLIAGGVPATGRPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPHAINEEEYLNPPV
EEEGNEETTEVVVDTAVETVEETVE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
gtggttgatgtaaatcgttttaaaagtatgcaaataaccctagcttctccaagtaaagtc
cgttcatggtcttatggagaagtcaaaaaacctgaaacaatcaattaccgtactttgaaa
ccagaacgtgaaggactcttcgatgaagtcatctttggtcctacaaaagactgggaatgt
gcttgtggtaagtacaaacgcattcgttacagagggattgtttgtgaccgctgtggggtt
gaagtaacgcgtacaaaagttcgtcgtgagcgtatggggcatatcgaattgaaagctcct
gtatctcacatctggtacttcaaggggattccaagtcgtatgggcttgacccttgatatg
agccctcgtgccctcgaggaagttatctactttgcggcttatgtggtgattgatcctaag
gatacaccactggagcacaagtctatcatgacagagcgcgaataccgtgagcgcttgcgt
gaatatggttatggatcattcgttgccaagatgggtgccgaagccatccaagaccttttg
aaacaagtagatcttgaaaaagaaattgctgaactcaaagaagagttgaaaacagctact
ggacaaaaacgtgtcaaagctatccgtcgtttggatgttttggatgccttttacaagtct
ggaaacaaacctgaatggatgattctcaacatccttccagttattccaccagatcttcgt
ccaatgttgcagttggatggtggccgttttgcctcatctgacttgaatgacctttaccgt
cgtgttatcaaccgtaacaaccgtttggctcgtttgcttgagttgaatgcaccaggtatc
atcgttcaaaatgagaagcgtatgcttcaagaagcggttgacgctttgattgacaatggt
cgtcgtggtcgtccaatcacaggaccaggtagccgtccgctgaaatcattgagccacatg
cttaaaggtaaacaaggacgtttccgtcaaaacttgctcggtaaacgtgttgacttctca
ggacgttccgttatcgccgttggtccaacacttaagatgtaccaatgtggtgtgccacgt
gaaatggcgatcgagctctttaaaccattcgtcatgcgtgaaattgtcgctcgtgacatc
gtgcaaaacgtgaaagcagctaaacgcttggtcgaacgtggagatgagcgtatctgggat
attcttgaagaagtgatcaaagaacacccagtacttttgaaccgcgcaccgacccttcac
cgtttgggtatccaagccttcgagccagtcttgattgatggtaaggcccttcgcttgcac
ccgcttgtctgtgaagcctacaatgccgactttgacggggaccaaatggccatccacgta
ccgctttcagaagaagcccaagcagaagctcgtatcttgatgctcgctgctgagcacatc
ttgaacccgaaagatggtaaaccagttgttactccatctcaggacatggttttgggtaac
tactacttgaccatggaagaagctggtcgtgaaggtgaaggaatggtcttcaaagaccgt
gacgaagcggttatggcttaccgtaatggttatgttcaccttcactcacgtgttggtatc
gcaacagacagcctcaacaagccttggacagaagagcaaaaacacaaggtattgcttaca
acagttggtaaaatcctcttcaacgacatcatgccagagggtctaccatacttgcaagaa
ccaaacaatgccaacttgacagaaggcgttccagctaaatacttcttgccacttggtgga
gatatcaaggaagcaatcagcaatcttgaacttaaccctccattcaagaagaaaaacctt
ggaaatatcatcgctgaaatcttcaaacgtttccgtacgacagaaacttctgccctactt
gaccgcatgaagaacctcggttaccatcactcaactcttgcaggattgacagtgggtatt
gccgatatcccagtcgttgatgacaaggctgaaatcattgaagaatcacacaaacgtgta
gaacaaatcacaaaacaattccgtcgtggtatgattacagacgacgagcgttacaatgct
gttacagctgaatggcgtgctgcccgtgaaaaacttgagaaacgcttgattgccaaccaa
gatcctaagaacccaatcgttatgatgatggactctggagcccgtggtaacatctcaaac
ttctcacagcttgccggtatgcgtggtctgatggctgctccgaacggacgtatcatggaa
ttgccaatcctttcaaacttccgcgaaggtttgtcggtattggaaatgttcttctcaact
cacggtgcgcgtaaaggtatgaccgatacggcccttaagacagccgactcaggttacttg
actcgtcgtttggttgacgttgcccaagatgttatcatccgtgaggacgactgtggaact
gaccgtggtctcttgatccgctctatcgcagaaggaaaagagatgatcgagtctctcgaa
gagcgtctcaatggtcgttacactaagaaaactgttaaacatccagaaactggtgcagtt
atcattggtccaaatgaattgattacagaagacaaggcgcgtgaaattgtcaatgctggt
gtggaagaagtgactatccgctctgtatttacatgtaacactcgtcatggtgtctgccgt
cactgttacggtatcaacttggcgactggtgatgcagttgaagttggtgaagcagttggt
acaatcgctgcccaatctatcggggaacctggtacacagcttacaatgcgtaccttccac
acgggtggggttgcctcaaataccgatatcactcagggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatcctaaaggggaagcggttatcacagaggttaaaggacaagttacc
gctatcgaagaagatgcatcaactcgtaccaagaaagtctttgttaagggtgaaactggc
gaaggtgagtacgtcgttccatttacagctcgtatgcgtgtagaagttggagaccaagta
gcgcgtggtgctgctcttacagaaggttctatccaaccaaaacgtctccttgcagtccgt
gatgtcttgtcagttgaaacttacctcctcggtgaagtacaaaaagtttaccgtagccaa
ggggtagaaatcggtgacaaacacatcgaggtaatggttcgtcaaatgatccgtaaagtc
cgtgtcatggatccaggagatacagaccttctcatgggtacccttatggatatcaatgac
tttacagatgctaacaaagatgtccttatcgcaggtggagttccagcgacaggtcgccca
gtccttatgggaattaccaaagcctcacttgaaacaaatagtttcttgtcagcggcttcc
ttccaggaaacaactcgtgtccttacagatgcagctatccgcggcaagaaagaccatctc
cttggacttaaagaaaatgttatcatcggtaagatcatcccagcaggtactggtatggct
cgctaccgtaaccttgaaccacatgctatcaacgaagaagaataccttaatcctccagta
gaggaagaaggaaatgaagaaacaacagaagtagttgtggatactgccgttgaaactgtg
gaagaaacagtagaataa
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integrated database retrieval system
