Streptococcus parapneumoniae: SP4011_06410
Help
Entry
SP4011_06410 CDS
T10256
Symbol
cshA_2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spam Streptococcus parapneumoniae
Pathway
spam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SP4011_06410 (cshA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spam03019
]
SP4011_06410 (cshA_2)
03009 Ribosome biogenesis [BR:
spam03009
]
SP4011_06410 (cshA_2)
Enzymes [BR:
spam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SP4011_06410 (cshA_2)
Messenger RNA biogenesis [BR:
spam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SP4011_06410 (cshA_2)
Ribosome biogenesis [BR:
spam03009
]
Prokaryotic type
rRNA helicases
SP4011_06410 (cshA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDT64224
LinkDB
All DBs
Position
676967..678541
Genome browser
AA seq
524 aa
AA seq
DB search
MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKEPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVEQPE
LAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTKK
RMKGLKPASAEEAFQAKKHVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRRGDDRRDNRRVDNRRGGRRD
DFKKGSRGNDRFDKEKRYRKDNKKPRNTSSEKKTGFVIRNKGDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaatgaattaaacttgtctgctgatttgttagcagagattgaaaaagctggt
tttgtagaagccagtccgatccaagaacaaactattcccttggcccttgaaggcaaggac
gttatcggtcaagctcagactggtacagggaaaaccgcagcttttggcttgcctaccctt
gaaaaaatccgtacagaagaagcgactatccaagccttggttatcgctccaacacgtgaa
ctagctgtccaaagtcaagaggaattgttccgttttggtcgtagcaagggagtcaaagtc
cgctcagtatatggcggatcgagcattgaaaaacaaattaaggctcttaaatctggtgcc
catatcgtggtgggaactcctggtcgcctcttggacttgattaaacgcaaggccttgaaa
ttacaagatattgaaacgctcatccttgatgaagcggatgaaatgctcaacatgggcttc
cttgaagatattgaagccatcatctcgcgtgtccctgaaaaccgtcaaactctactcttc
tcagcaactatgccagatgccatcaaacgtatcggtgttcagtttatgaaagaacctgag
catgtgaagattgctgctaaggaattgacaacagaattggttgaccagtactatatccga
gttaaagaacaagaaaaatttgacaccatgactcgtctcatggatgtggagcaacctgag
cttgctatcgtatttggtcgtaccaagcgccgtgtagatgaattgactcgtggtctgaaa
atccgtggcttccgtgcagaaggaattcatggtgatttggaccaaaacaaacgtcttcgt
gtccttcgtgactttaaaaatggcaatcttgatgttttggttgcgacagacgtggcagcg
cgtggtttggatatttcaggtgtgacccatgtctataactacgatattccacaagatcct
gaaagttatgttcaccgtatcggtcgtacaggtcgtgctggtaagtcaggccagtcgatt
acttttgttgctccaaacgaaatgggctaccttcaaatcattgaaaacttgaccaagaaa
cgcatgaaaggtcttaaacctgcaagtgcagaagaagccttccaagctaaaaaacacgta
gctctcaagaaaatcgaacgtgattttgcagatgaaactattcgtgccaactttgagaaa
tttggcaaggatgctcgtaagctagctgccgaatttactccagaagaattggcaatgtat
attttgagtctgactgttcaagatccagatagccttcctgaagtggagattgcgcgtgaa
aaaccactgccatttaaaccatcaggtaatggctttggtggtaaagctaagggaggtcgt
cgtggagatgaccgtcgtgataatcgccgtgtagacaatcgtcgtggtggtcgccgtgat
gatttcaaaaaaggaagtcgtggcaatgatcgttttgataaggaaaaacgttaccgtaag
gataataaaaaaccacgcaatacttcaagcgaaaagaaaacaggctttgtgattcgtaac
aagggcgataaataa
DBGET
integrated database retrieval system
