Streptococcus parapneumoniae: SP4011_16650
Help
Entry
SP4011_16650 CDS
T10256
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spam Streptococcus parapneumoniae
Pathway
spam03410
Base excision repair
spam03430
Mismatch repair
spam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SP4011_16650 (recJ)
03430 Mismatch repair
SP4011_16650 (recJ)
03440 Homologous recombination
SP4011_16650 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spam03400
]
SP4011_16650 (recJ)
DNA repair and recombination proteins [BR:
spam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SP4011_16650 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SP4011_16650 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SP4011_16650 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
BDT65248
LinkDB
All DBs
Position
complement(1682467..1684689)
Genome browser
AA seq
740 aa
AA seq
DB search
MITPTYEWQFAPQVEDADFTKIAKKAGLGPEVARLLFERGIQDQESLKKFLEPSLEDLHD
PYLLHDMDKAVERIRHAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYLPNRF
TDGYGPNASVYKYFIEQEGISLIVTVDNGVAGHEAIELAQSMGVDVIVTDHHSMPETLPD
AYAIVHPEHPDADYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTVADMVSLTDENR
ILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNPAIDL
LTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGVLGIV
AGRLLEELGQTVIVLNIEDGRAKGSARSVEVVDIFEALDPHRDLFIAFGGHAGAAGMTLE
VEKLSDLSQVLEDYVREKGADAAGKNKLNLDEELDLETLSLETVKNFERLAPFGMDNQKP
VFYIKDFQVESARTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFAQTKNLELAVKLS
VNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFSGELPNLADSEAIVVKT
IPEDITLLKTIFQKQNFSAVYFKNDIDKAYYLTGYGTREQFAKLYKTIYQFPEFDIRYKL
KDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESQIYQNLKQTVKD
QEMMALGTVQEIYDFLMEKE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgataacacctacttatgaatggcagtttgccccgcaagtagaagatgcggattttaca
aagatagccaagaaggctggattgggtcctgaggtggctcggttattatttgagagaggg
attcaggaccaagaaagtctgaagaagtttttagaaccttccttggaggacttgcacgac
ccttatctgctccatgatatggacaaggcggtggaacggattcgtcatgccattgaagaa
ggggaaaatattctcgtttatggtgattatgatgcggatggtatgacttcggcttcgatt
gttaaggaaagtttggaacagcttggtgccgagtgccgggtttatcttcccaatcgtttt
accgacggttatggacctaatgccagtgtttacaaatattttatcgagcaagaaggaatt
tccttgattgtgacggtggataatggggttgctggtcacgaggctattgaattggcccag
tctatgggagtagatgtcattgtgactgaccatcattccatgcctgaaaccttacctgat
gcctatgccatcgttcatcctgaacatccagatgcggactatcctttcaaatatttggcg
ggttgtggagtggccttcaagctggcttgtgccctgttagaagaagtgcaagtggaattg
cttgatttggtcgctattggtaccgttgcagatatggttagtttgacagatgagaaccgt
atcttggttcagtatggtctggaaatgttgggacatactcagcgtattggtctacaagaa
atgctggatatggctgggattgctgccaatgaagtgacagaagagacagttggtttccag
attgctcctcgtttaaatgccttaggtcgcttggacgatcccaatccagccattgatttg
ctgactggatttgacgacgaggaagctcacgagattgcccttatgattcatcagaaaaac
gaagagcgcaaggaaatcgtccagtcaatttatgaagaagctaagaccatggtggatcct
gaaaagaaggtccaagtcttggccaaggaaggctggaatcctggggttctaggaatcgtg
gctggtcgtttgttggaagaattgggacagacagtcattgttcttaatatagaagacggt
cgtgccaaaggcagtgctcgtagtgtggaagtagtagatatttttgaggctctggatcct
catcgagatctttttatcgcctttggtggacatgctggtgcagcagggatgacgctggaa
gtggagaaactctcagatttatctcaggtcttggaagattatgttcgtgaaaaaggtgca
gatgctgctggcaagaataagttaaacctagatgaagagttggatttggagactttgagt
cttgaaacagtcaagaactttgagcgcttggcaccttttggaatggataatcagaaacct
gtcttttatatcaaggattttcaggtcgaaagtgcccgtactatgggggcaggcaatgcc
catctcaaactgaaaatctctaagggggaagctagttttgaagtggtagcctttggacaa
ggtagatgggcaacagaatttgcccaaaccaagaatctagagttggcggttaaattgtct
gtcaatcaatggaatggtcaaactgctctccagttgatgatggtagatgcgcgtgtggag
ggtgttcaactctttaacattcgtgggaaaaatgcagtcttgccagaaggagttccagtc
ttggatttttctggagaactgccaaatcttgcggatagtgaagctattgtcgtgaaaacc
attcctgaggatattaccctgctgaagaccatttttcagaaacagaatttttccgctgtc
tatttcaaaaatgatattgacaaggcctactatctgacagggtatgggactagagagcag
tttgccaaattgtacaagaccatttaccagtttccagagtttgatattcgctacaagctg
aaagatttggcagcttatcttaatatccaacaaatcttgctggtcaagatgattcaagta
tttgaagagctaggctttgtgacgatcaaagatggtgtcatgacagtgaataaagaggca
ccaaagcgggaaatcggagaaagtcaaatttaccagaatctcaaacaaaccgtcaaagac
caagaaatgatggcgctgggtaccgtgcaagaaatttatgactttttaatggaaaaagag
tag
DBGET
integrated database retrieval system
